Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   AEI02_RS06880 Genome accession   NZ_CP012206
Coordinates   1305877..1306845 (+) Length   322 a.a.
NCBI ID   WP_052825504.1    Uniprot ID   A0A5Y6TH70
Organism   Campylobacter jejuni strain CJ067CC45     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1300877..1311845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI02_RS06855 (AEI02_06850) cdsA 1301785..1302510 (-) 726 WP_052825500.1 phosphatidate cytidylyltransferase -
  AEI02_RS06860 (AEI02_06855) - 1302521..1302859 (-) 339 WP_002855905.1 hypothetical protein -
  AEI02_RS06865 (AEI02_06860) - 1302861..1304168 (-) 1308 WP_052825501.1 NFACT family protein -
  AEI02_RS06870 (AEI02_06865) mobA 1304230..1304805 (+) 576 WP_052825502.1 molybdenum cofactor guanylyltransferase -
  AEI02_RS06875 (AEI02_06870) pldA 1304802..1305791 (+) 990 WP_052825503.1 phospholipase A -
  AEI02_RS06880 (AEI02_06875) ceuB 1305877..1306845 (+) 969 WP_052825504.1 ABC transporter permease Machinery gene
  AEI02_RS06885 (AEI02_06880) ceuC 1306838..1307776 (+) 939 WP_115784903.1 iron chelate uptake ABC transporter family permease subunit -
  AEI02_RS06890 (AEI02_06885) ceuD 1307773..1308528 (+) 756 WP_052825505.1 ABC transporter ATP-binding protein -
  AEI02_RS06895 (AEI02_06890) ceuB 1308541..1309533 (+) 993 WP_052825506.1 enterochelin ABC transporter substrate-binding protein CeuB -
  AEI02_RS06900 (AEI02_06895) - 1309689..1309910 (+) 222 WP_002866774.1 hypothetical protein -
  AEI02_RS06905 (AEI02_06900) - 1309911..1310192 (+) 282 WP_002866775.1 type II toxin-antitoxin system RelE/ParE family toxin -
  AEI02_RS06915 (AEI02_06910) - 1310554..1311108 (-) 555 WP_002855904.1 membrane protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35429.29 Da        Isoelectric Point: 9.6678

>NTDB_id=152248 AEI02_RS06880 WP_052825504.1 1305877..1306845(+) (ceuB) [Campylobacter jejuni strain CJ067CC45]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFSGASFFTQATIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=152248 AEI02_RS06880 WP_052825504.1 1305877..1306845(+) (ceuB) [Campylobacter jejuni strain CJ067CC45]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATCCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTTCTGGAGCATC
TTTTTTCACTCAAGCTACCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGCATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5Y6TH70

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991


Multiple sequence alignment