Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI02_RS05040 | Genome accession | NZ_CP012206 |
| Coordinates | 966372..966674 (+) | Length | 100 a.a. |
| NCBI ID | WP_002877750.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ067CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 961372..971674
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI02_RS05015 (AEI02_05015) | rpsR | 961734..961994 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI02_RS05020 (AEI02_05020) | lon | 962055..964430 (-) | 2376 | WP_038402136.1 | endopeptidase La | - |
| AEI02_RS05025 (AEI02_05025) | - | 964447..965094 (-) | 648 | WP_012006727.1 | outer membrane protein assembly factor BamD | - |
| AEI02_RS05030 (AEI02_05030) | fliW | 965255..965644 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI02_RS05035 (AEI02_05035) | proC | 965644..966375 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI02_RS05040 (AEI02_05040) | ctsT | 966372..966674 (+) | 303 | WP_002877750.1 | hypothetical protein | Machinery gene |
| AEI02_RS05045 (AEI02_05045) | - | 966671..967333 (+) | 663 | WP_002877751.1 | hypothetical protein | - |
| AEI02_RS05050 (AEI02_05050) | - | 967330..967782 (+) | 453 | WP_002877757.1 | hypothetical protein | - |
| AEI02_RS05055 (AEI02_05055) | hemD | 967779..968408 (-) | 630 | WP_002877758.1 | uroporphyrinogen-III synthase | - |
| AEI02_RS05060 (AEI02_05060) | thiE | 968386..969018 (-) | 633 | WP_002877759.1 | thiamine phosphate synthase | - |
| AEI02_RS05065 (AEI02_05065) | thiD | 969008..969820 (-) | 813 | WP_002877760.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI02_RS05070 (AEI02_05070) | - | 969817..970503 (-) | 687 | WP_002866108.1 | endonuclease III domain-containing protein | - |
| AEI02_RS05075 (AEI02_05075) | - | 970500..971261 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12138.20 Da Isoelectric Point: 7.0039
>NTDB_id=152240 AEI02_RS05040 WP_002877750.1 966372..966674(+) (ctsT) [Campylobacter jejuni strain CJ067CC45]
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152240 AEI02_RS05040 WP_002877750.1 966372..966674(+) (ctsT) [Campylobacter jejuni strain CJ067CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |