Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   AEI05_RS07505 Genome accession   NZ_CP012205
Coordinates   1425361..1426545 (-) Length   394 a.a.
NCBI ID   WP_022552397.1    Uniprot ID   A0AA44HKV0
Organism   Campylobacter jejuni strain CJ510CC45     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1420361..1431545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI05_RS07480 (AEI05_07490) fliL 1421510..1422046 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  AEI05_RS07485 (AEI05_07495) acpS 1422046..1422393 (+) 348 WP_002825806.1 holo-ACP synthase -
  AEI05_RS07490 (AEI05_07500) - 1422394..1422813 (-) 420 WP_002880391.1 hypothetical protein -
  AEI05_RS07495 (AEI05_07505) - 1422810..1424171 (-) 1362 WP_014517093.1 cytochrome P450 -
  AEI05_RS07500 (AEI05_07510) - 1424168..1425289 (-) 1122 WP_057042690.1 hypothetical protein -
  AEI05_RS07505 (AEI05_07515) kpsS 1425361..1426545 (-) 1185 WP_022552397.1 capsule polysaccharide modification protein KpsS Regulator
  AEI05_RS07510 (AEI05_07520) kpsC 1426542..1428611 (-) 2070 WP_052802071.1 capsular polysaccharide biosynthesis protein -
  AEI05_RS07515 (AEI05_07525) - 1428689..1429942 (-) 1254 WP_022552399.1 cation:proton antiporter -
  AEI05_RS07520 (AEI05_07530) - 1430029..1430775 (-) 747 WP_409514336.1 pyruvate kinase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46772.53 Da        Isoelectric Point: 9.9368

>NTDB_id=152224 AEI05_RS07505 WP_022552397.1 1425361..1426545(-) (kpsS) [Campylobacter jejuni strain CJ510CC45]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHLLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGVEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPILACNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=152224 AEI05_RS07505 WP_022552397.1 1425361..1426545(-) (kpsS) [Campylobacter jejuni strain CJ510CC45]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGACCTGTGGGAAATTTTTT
TCACCTTCTTGCAATAAAAATGAAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAGTTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACTAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCCTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCCCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATACAGAAAATATCTTTACAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAGAAGCTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTATTTTGGCATGTAATTTTAAGA
AATACCTTTTACAAACTAATCAATTCAACGGCAATTTTTACAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

97.208

100

0.972


Multiple sequence alignment