Detailed information NTG0152045

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: A4X18_RS07825
• Genome accession: NZ_CP015138
• Coordinates: 1609219..1610244 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain Ecol_732
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1604219..1615244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4X18_RS07805 (A4X18_07800)	metJ	1605404..1605721 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
A4X18_RS07810 (A4X18_07805)	yiiX	1605781..1606389 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
A4X18_RS07815 (A4X18_07810)	rpmE	1606450..1606662 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
A4X18_RS07820 (A4X18_07815)	priA	1606865..1609063 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
A4X18_RS07825 (A4X18_07820)	cytR	1609219..1610244 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
A4X18_RS07830 (A4X18_07825)	ftsN	1610336..1611295 (+)	960	WP_000068834.1	cell division protein FtsN	-
A4X18_RS07835 (A4X18_07830)	hslV	1611388..1611918 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
A4X18_RS07840 (A4X18_07835)	hslU	1611928..1613259 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
A4X18_RS07845 (A4X18_07840)	menA	1613326..1614252 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
A4X18_RS07850 (A4X18_07845)	rraA	1614345..1614830 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
A4X18_RS07855 (A4X18_07850)	zapB	1614915..1615160 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=152045 A4X18_RS07825 WP_000644908.1 1609219..1610244(+) (cytR) [Escherichia coli strain Ecol_732]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=152045 A4X18_RS07825 WP_000644908.1 1609219..1610244(+) (cytR) [Escherichia coli strain Ecol_732]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625