Detailed information    

insolico Bioinformatically predicted

Overview

Name   recJ   Type   Machinery gene
Locus tag   AFK25_RS10760 Genome accession   NZ_CP012152
Coordinates   2044819..2047179 (-) Length   786 a.a.
NCBI ID   WP_035067184.1    Uniprot ID   A0AAW7TKE7
Organism   Anoxybacillus gonensis strain G2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2039819..2052179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AFK25_RS10735 (AFK25_10755) - 2039983..2041242 (-) 1260 WP_035067178.1 N-acetylmuramoyl-L-alanine amidase -
  AFK25_RS15130 (AFK25_10760) - 2041375..2041548 (+) 174 WP_009361696.1 hypothetical protein -
  AFK25_RS10745 (AFK25_10765) dtd 2041583..2042023 (-) 441 WP_009361697.1 D-aminoacyl-tRNA deacylase -
  AFK25_RS10750 (AFK25_10770) - 2042038..2044236 (-) 2199 WP_035067181.1 RelA/SpoT family protein -
  AFK25_RS10755 (AFK25_10775) - 2044341..2044853 (-) 513 WP_009361699.1 adenine phosphoribosyltransferase -
  AFK25_RS10760 (AFK25_10780) recJ 2044819..2047179 (-) 2361 WP_035067184.1 single-stranded-DNA-specific exonuclease RecJ Machinery gene
  AFK25_RS10765 (AFK25_10785) - 2047233..2048126 (-) 894 WP_009361701.1 cation diffusion facilitator family transporter -
  AFK25_RS10770 (AFK25_10790) secDF 2048210..2050456 (-) 2247 WP_009361702.1 protein translocase subunit SecDF -
  AFK25_RS10775 (AFK25_10795) - 2050552..2050824 (-) 273 WP_035067187.1 post-transcriptional regulator -

Sequence

Protein


Download         Length: 786 a.a.        Molecular weight: 88646.63 Da        Isoelectric Point: 6.2121

>NTDB_id=151921 AFK25_RS10760 WP_035067184.1 2044819..2047179(-) (recJ) [Anoxybacillus gonensis strain G2]
MLASKTRWNMKQVNEQQVQMIAQALHIAPLVATLLVSRGYDTVEAARSFFEQKQSFHSPFLLNDMEKAVERIEKAITKGE
HILVFGDYDADGVSSTVVMVSALREKGANVSFYIPNRFLEGYGPNEQAFRLAKEQGVSLIITVDTGISALHEATVAKQLG
IDLIITDHHEPGPVLPEAYATIHPKISPNYPFKHLAGVGVAFKLAHALIGRVPYEWLDVVAIGTIADLVPLQDENHLLAR
LGIEQFRQTNRLGLQALCKQCGVSHTAVTEDTIAFMIGPRINAAGRLDCADPAVQLLLTTDAHEADMLAEQIDMMNRERQ
QLVNDITEEAIQLVEQHYADDRVLVVAKEGWNVGVIGIVASRLVERFYRPTIVLSIDQEKGIAKGSARSIEGFDLFANLS
NCRDILPHFGGHPMAAGMTLSLHDVDELRHRLNEAAMQQLTPEHFVPVTHVDVCCSISDVSIELIEQMNRLAPFGMGNPK
PRVLLEHVQLDTLRKIGTDQNHLKLLLVEDGKTLEAIGFGFGHIGDEIAPNAHLSVVGELSINEWNNFRKPQLMIQDIAV
NEWQLFDVRHIRHPSKFIASLPKEKRLFIAFHPDTADALQLSAYANEIVYVQNEQAATVDVTGKYVVLLDLPPSQQIVKV
LLSCSLPERIYALFYQRESHFFSVLPTREHFKWLYSFLHKRSPFDVRRYADDLARSRGWTKETILFMIQVFRELGFITVE
NGIVSLARDVQKRDLTESPSYRLKQAQAELEHMFLYSSYSQLKRWFDSLYEEEKVNGFKTIRHDCS

Nucleotide


Download         Length: 2361 bp        

>NTDB_id=151921 AFK25_RS10760 WP_035067184.1 2044819..2047179(-) (recJ) [Anoxybacillus gonensis strain G2]
ATGTTAGCATCGAAAACCCGCTGGAACATGAAACAAGTAAACGAACAACAAGTGCAAATGATTGCGCAAGCGTTACATAT
AGCTCCGCTCGTTGCTACATTGCTCGTCAGCCGCGGCTACGATACCGTTGAAGCCGCTCGTTCTTTTTTTGAGCAAAAGC
AATCGTTTCACTCGCCATTTTTGTTAAACGATATGGAAAAAGCGGTTGAGCGAATAGAGAAAGCGATTACAAAAGGTGAA
CATATTCTCGTTTTTGGCGATTATGATGCCGACGGAGTAAGTAGTACAGTCGTGATGGTGAGTGCGTTACGAGAAAAAGG
AGCGAATGTATCCTTCTACATTCCAAACCGCTTTTTAGAAGGATACGGTCCGAACGAACAAGCATTTCGGCTTGCGAAAG
AACAAGGTGTTTCACTAATTATTACAGTCGATACAGGCATTTCCGCTTTGCATGAAGCAACCGTAGCAAAACAGCTTGGC
ATCGATTTAATTATTACCGATCATCACGAACCAGGTCCTGTGCTGCCTGAAGCGTATGCGACGATCCATCCGAAAATTAG
TCCAAATTATCCGTTTAAACATTTAGCCGGCGTCGGTGTAGCATTTAAACTCGCTCATGCGCTTATCGGGCGCGTGCCGT
ATGAATGGCTGGACGTCGTCGCAATTGGAACGATTGCTGATCTCGTTCCACTTCAAGATGAAAACCATTTACTTGCTCGG
TTAGGCATTGAACAATTTCGACAAACGAACCGTCTCGGCTTACAGGCGCTTTGTAAACAATGTGGCGTATCTCATACGGC
GGTGACAGAAGATACGATTGCGTTTATGATCGGTCCACGCATTAATGCGGCCGGACGTCTCGATTGTGCTGATCCTGCTG
TGCAGTTATTGTTGACGACGGATGCGCATGAAGCGGACATGCTCGCTGAACAAATTGATATGATGAATCGCGAGCGTCAA
CAACTCGTAAACGACATAACAGAAGAAGCGATTCAACTCGTTGAACAACATTATGCGGACGACCGTGTGTTAGTTGTAGC
GAAAGAAGGATGGAATGTTGGCGTCATTGGCATTGTTGCTTCGCGATTAGTGGAACGATTTTACCGTCCGACGATCGTTT
TAAGTATTGATCAAGAAAAGGGAATCGCGAAAGGATCAGCGCGCAGCATTGAGGGATTTGATTTATTTGCCAATTTGTCA
AACTGCCGCGACATTTTACCTCATTTTGGTGGGCATCCGATGGCTGCAGGGATGACGCTTTCTTTACATGATGTAGATGA
ATTACGTCACCGTCTAAACGAGGCAGCGATGCAACAGCTAACTCCTGAACATTTCGTGCCTGTTACGCATGTCGATGTAT
GCTGTTCCATCTCGGACGTTTCCATCGAATTAATTGAGCAAATGAATCGGCTTGCACCGTTTGGGATGGGCAATCCGAAA
CCGCGTGTGCTTCTCGAACATGTGCAGCTTGATACGTTACGAAAAATTGGAACAGACCAAAACCACTTGAAATTGTTGTT
AGTTGAAGATGGAAAGACGTTAGAGGCGATCGGATTTGGTTTTGGACATATTGGCGATGAAATTGCACCGAACGCCCATC
TTTCGGTCGTAGGTGAGTTATCCATTAACGAATGGAATAACTTTCGTAAACCGCAATTAATGATTCAAGATATAGCTGTG
AATGAGTGGCAATTGTTTGATGTTCGTCATATTCGTCATCCAAGCAAGTTCATTGCATCGCTTCCGAAAGAAAAGCGATT
ATTTATTGCTTTTCATCCTGACACAGCAGATGCGTTGCAATTGTCGGCATACGCGAATGAAATTGTCTATGTGCAAAACG
AACAAGCAGCGACAGTTGATGTGACTGGAAAATATGTCGTTCTTCTTGATTTACCGCCATCACAGCAAATCGTTAAAGTT
TTATTAAGTTGTAGTTTACCTGAACGCATTTATGCGTTATTCTATCAAAGGGAGAGTCACTTCTTTAGCGTGTTGCCAAC
GCGTGAACATTTTAAGTGGCTATATTCCTTTTTGCATAAGCGTAGCCCGTTTGATGTGCGGCGTTACGCTGACGATTTAG
CTCGCTCGCGCGGATGGACGAAAGAAACGATTTTGTTTATGATTCAAGTGTTCAGAGAGCTTGGTTTCATTACAGTCGAA
AACGGGATCGTTTCTTTAGCTCGTGATGTACAAAAGCGGGATTTAACGGAATCGCCGTCTTATCGTTTGAAACAAGCGCA
GGCAGAGCTTGAACATATGTTTTTATATTCATCTTATTCCCAACTGAAACGTTGGTTTGATTCATTGTATGAGGAGGAAA
AAGTCAATGGATTTAAAACAATACGTCACGATTGTTCCTGA

Domains

Predicted by InterproScan.

Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C)

(564-766)

DHHA1 domain (DHHA1)

(315-435)

DHH family (DHH)

(81-224)

RecJ OB domain (RecJ_OB)

(451-557)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recJ Bacillus subtilis subsp. subtilis str. 168

54.124

98.728

0.534

Multiple sequence alignment