Detailed information NTG0151871

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CJM1cam_RS05610
• Genome accession: NZ_CP012149
• Coordinates: 1093307..1094257 (+)
• Length: 316 a.a.
• NCBI ID: WP_002866164.1
• Uniprot ID: Q9ALT6
• Organism: Campylobacter jejuni strain CJM1cam
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1088307..1099257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJM1cam_RS05585 (CJM1cam_1124)	-	1088665..1089678 (-)	1014	WP_041176748.1	hypothetical protein	-
CJM1cam_RS05590 (CJM1cam_1125)	-	1089749..1090522 (+)	774	WP_002866160.1	glycosyltransferase family 25 protein	-
CJM1cam_RS05595 (CJM1cam_1126)	wlaTB	1090515..1091471 (+)	957	WP_002869613.1	class E lipooligosaccharide biosynthesis protein WlaTB	-
CJM1cam_RS05600 (CJM1cam_1127)	wlaTC	1091468..1092427 (+)	960	WP_012006735.1	class E lipooligosaccharide biosynthesis protein WlaTC	-
CJM1cam_RS05605 (CJM1cam_1128)	-	1092430..1093248 (-)	819	WP_014517064.1	glycosyltransferase family 2 protein	-
CJM1cam_RS05610 (CJM1cam_1129)	waaF	1093307..1094257 (+)	951	WP_002866164.1	lipopolysaccharide heptosyltransferase II	Regulator
CJM1cam_RS05615 (CJM1cam_1130)	-	1094309..1095808 (+)	1500	WP_002877116.1	MBOAT family O-acyltransferase	-
CJM1cam_RS05620 (CJM1cam_1131)	-	1095818..1096933 (+)	1116	WP_002877117.1	hypothetical protein	-
CJM1cam_RS05625 (CJM1cam_1132)	gmhA	1096937..1097497 (-)	561	WP_002877119.1	D-sedoheptulose 7-phosphate isomerase	-
CJM1cam_RS05630 (CJM1cam_1133)	rfaE1	1097494..1098879 (-)	1386	WP_014517065.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36378.95 Da
• Isoelectric Point: 10.3102

>NTDB_id=151871 CJM1cam_RS05610 WP_002866164.1 1093307..1094257(+) (waaF) [Campylobacter jejuni strain CJM1cam]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNTQFILYGSLVSTALFREFPNSKIIIENKQTRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISTVYKIKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTP

Nucleotide

• Length: 951 bp

>NTDB_id=151871 CJM1cam_RS05610 WP_002866164.1 1093307..1094257(+) (waaF) [Campylobacter jejuni strain CJM1cam]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATACCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAGGGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAAACCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTACGGTTTATAAGATAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAGC
ACCATAAATGCATGAAAGATCTAAAGCCTGAAAAGGTGATAGAAGAAATTAAAAAATTAAGCACTCCATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q9ALT6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.249	99.051	0.934