Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CJM1cam_RS05245 | Genome accession | NZ_CP012149 |
| Coordinates | 1021889..1022191 (+) | Length | 100 a.a. |
| NCBI ID | WP_002877750.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJM1cam | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1016889..1027191
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJM1cam_RS05220 (CJM1cam_1049) | rpsR | 1017251..1017511 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CJM1cam_RS05225 (CJM1cam_1050) | lon | 1017572..1019947 (-) | 2376 | WP_014517043.1 | endopeptidase La | - |
| CJM1cam_RS05230 (CJM1cam_1051) | - | 1019964..1020611 (-) | 648 | WP_014517044.1 | outer membrane protein assembly factor BamD | - |
| CJM1cam_RS05235 (CJM1cam_1052) | fliW | 1020772..1021161 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CJM1cam_RS05240 (CJM1cam_1053) | proC | 1021161..1021892 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CJM1cam_RS05245 (CJM1cam_1054) | ctsT | 1021889..1022191 (+) | 303 | WP_002877750.1 | hypothetical protein | Machinery gene |
| CJM1cam_RS05250 (CJM1cam_1055) | - | 1022188..1022850 (+) | 663 | WP_002877751.1 | hypothetical protein | - |
| CJM1cam_RS05255 (CJM1cam_1056) | - | 1022847..1023299 (+) | 453 | WP_002877757.1 | hypothetical protein | - |
| CJM1cam_RS05260 (CJM1cam_1057) | hemD | 1023296..1023925 (-) | 630 | WP_002877758.1 | uroporphyrinogen-III synthase | - |
| CJM1cam_RS05265 (CJM1cam_1058) | thiE | 1023903..1024535 (-) | 633 | WP_002877759.1 | thiamine phosphate synthase | - |
| CJM1cam_RS05270 (CJM1cam_1059) | thiD | 1024525..1025337 (-) | 813 | WP_002877760.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CJM1cam_RS05275 (CJM1cam_1060) | - | 1025334..1026020 (-) | 687 | WP_002866108.1 | endonuclease III domain-containing protein | - |
| CJM1cam_RS05280 (CJM1cam_1061) | - | 1026017..1026778 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12138.20 Da Isoelectric Point: 7.0039
>NTDB_id=151869 CJM1cam_RS05245 WP_002877750.1 1021889..1022191(+) (ctsT) [Campylobacter jejuni strain CJM1cam]
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=151869 CJM1cam_RS05245 WP_002877750.1 1021889..1022191(+) (ctsT) [Campylobacter jejuni strain CJM1cam]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |