Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AC251_RS15075 Genome accession   NZ_CP015115
Coordinates   3202897..3203340 (-) Length   147 a.a.
NCBI ID   WP_071615340.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain EP1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3197897..3208340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC251_RS15060 (AC251_14635) - 3199416..3201647 (-) 2232 WP_011000626.1 methyl-accepting chemotaxis protein -
  AC251_RS15065 (AC251_14640) - 3201893..3202438 (-) 546 WP_011000625.1 chemotaxis protein CheW -
  AC251_RS15070 (AC251_14645) pilH 3202497..3202865 (-) 369 WP_003269243.1 response regulator Machinery gene
  AC251_RS15075 (AC251_14650) pilG 3202897..3203340 (-) 444 WP_071615340.1 response regulator Regulator
  AC251_RS15080 (AC251_14655) - 3203655..3203837 (-) 183 WP_003261842.1 rubredoxin -
  AC251_RS15085 (AC251_14660) hemL 3204049..3205350 (+) 1302 WP_011000623.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AC251_RS15090 (AC251_14665) dapA 3205453..3206367 (-) 915 WP_071507572.1 4-hydroxy-tetrahydrodipicolinate synthase -
  AC251_RS15095 (AC251_14670) - 3206748..3207374 (+) 627 WP_016723449.1 LemA family protein -
  AC251_RS15100 (AC251_14675) - 3207387..3208241 (+) 855 WP_071507573.1 TPM domain-containing protein -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 15807.37 Da        Isoelectric Point: 8.2887

>NTDB_id=151820 AC251_RS15075 WP_071615340.1 3202897..3203340(-) (pilG) [Ralstonia pseudosolanacearum strain EP1]
MQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCDILMPKLDG
YLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 444 bp        

>NTDB_id=151820 AC251_RS15075 WP_071615340.1 3202897..3203340(-) (pilG) [Ralstonia pseudosolanacearum strain EP1]
ATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCTTGCCGGCCGTAAAGTGCTGGTGAT
CGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATTGCCAGGTCGTGCTGGCCGAAGACG
GGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGACATCCTGATGCCCAAGCTGGACGGT
TACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGTCATGCTGTCGTCGCGCGACGGGGT
GTTCGACCGCGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTTTCTCGCGGGAAGCGCTGCTGGAGG
CGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(24-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

80.952

0.442