Detailed information NTG0151706

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: WLH_RS15720
• Genome accession: NZ_CP015085
• Coordinates: 3028335..3029360 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli O25b:H4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3023335..3034360

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WLH_RS15690 (WLH_03229)	zapB	3023419..3023664 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
WLH_RS15695 (WLH_03230)	rraA	3023749..3024234 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
WLH_RS15700 (WLH_03231)	menA	3024327..3025253 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
WLH_RS15705 (WLH_03232)	hslU	3025320..3026651 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
WLH_RS15710 (WLH_03233)	hslV	3026661..3027191 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
WLH_RS15715 (WLH_03234)	ftsN	3027284..3028243 (-)	960	WP_000068834.1	cell division protein FtsN	-
WLH_RS15720 (WLH_03235)	cytR	3028335..3029360 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
WLH_RS15725 (WLH_03236)	priA	3029516..3031714 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
WLH_RS15730 (WLH_03238)	rpmE	3031917..3032129 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
WLH_RS15735 (WLH_03239)	yiiX	3032190..3032798 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
WLH_RS15740 (WLH_03240)	metJ	3032858..3033175 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=151706 WLH_RS15720 WP_000644908.1 3028335..3029360(-) (cytR) [Escherichia coli O25b:H4]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=151706 WLH_RS15720 WP_000644908.1 3028335..3029360(-) (cytR) [Escherichia coli O25b:H4]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625