Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   AC241_RS20670 Genome accession   NZ_CP012099
Coordinates   4027465..4028259 (-) Length   264 a.a.
NCBI ID   WP_042969082.1    Uniprot ID   A0A9X0EVU2
Organism   Bacillus thuringiensis strain HS18-1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4022465..4033259
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC241_RS20645 (AC241_20665) - 4022992..4025064 (-) 2073 WP_050844504.1 sigma-54 interaction domain-containing protein -
  AC241_RS20650 (AC241_20670) - 4025202..4025435 (+) 234 WP_001190212.1 DUF2627 domain-containing protein -
  AC241_RS20655 (AC241_20675) - 4025485..4026213 (-) 729 WP_050844505.1 glycerophosphodiester phosphodiesterase -
  AC241_RS20660 (AC241_20680) - 4026264..4026410 (+) 147 WP_001247671.1 YycC family protein -
  AC241_RS20665 (AC241_20685) - 4026650..4027213 (-) 564 WP_016080328.1 PRK06770 family protein -
  AC241_RS20670 (AC241_20690) spo0A 4027465..4028259 (-) 795 WP_042969082.1 sporulation transcription factor Spo0A Regulator
  AC241_RS20680 (AC241_20700) spoIVB 4028547..4029845 (-) 1299 WP_002000940.1 SpoIVB peptidase -
  AC241_RS20685 (AC241_20705) recN 4029964..4031703 (-) 1740 WP_029443279.1 DNA repair protein RecN Machinery gene
  AC241_RS20690 (AC241_20710) argR 4031969..4032418 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29455.25 Da        Isoelectric Point: 7.1176

>NTDB_id=151397 AC241_RS20670 WP_042969082.1 4027465..4028259(-) (spo0A) [Bacillus thuringiensis strain HS18-1]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=151397 AC241_RS20670 WP_042969082.1 4027465..4028259(-) (spo0A) [Bacillus thuringiensis strain HS18-1]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTATTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGGTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACCACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGTAATATTGATTCTATTTCATCCTTATTTGGCTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAACTGAGACTTGAACATAAAGCTAGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814

Multiple sequence alignment