Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   AC241_RS19800 Genome accession   NZ_CP012099
Coordinates   3875272..3875706 (-) Length   144 a.a.
NCBI ID   WP_000811494.1    Uniprot ID   A0A9Q6M5X1
Organism   Bacillus thuringiensis strain HS18-1     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3870272..3880706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC241_RS19780 (AC241_19795) - 3871449..3872006 (+) 558 WP_016080434.1 PadR family transcriptional regulator -
  AC241_RS19790 (AC241_19805) metE 3872519..3874807 (+) 2289 WP_043937823.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  AC241_RS19795 (AC241_19810) - 3874846..3875235 (-) 390 WP_016080432.1 competence protein ComJ -
  AC241_RS19800 (AC241_19815) nucA/comI 3875272..3875706 (-) 435 WP_000811494.1 DNA-entry nuclease Machinery gene
  AC241_RS19805 (AC241_19820) - 3875933..3876682 (+) 750 WP_000388467.1 DUF3967 domain-containing protein -
  AC241_RS19810 (AC241_19825) kinB 3876721..3877995 (-) 1275 WP_048563883.1 sporulation sensor histidine kinase KinB -
  AC241_RS19815 (AC241_19830) - 3878306..3878506 (+) 201 WP_000929276.1 hypothetical protein -
  AC241_RS19820 (AC241_19835) - 3878628..3879791 (+) 1164 WP_043937828.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16054.43 Da        Isoelectric Point: 8.4331

>NTDB_id=151396 AC241_RS19800 WP_000811494.1 3875272..3875706(-) (nucA/comI) [Bacillus thuringiensis strain HS18-1]
MKQLKGIIISIIAILSILVAVYEVLVPEETSVKKTNTYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFEVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=151396 AC241_RS19800 WP_000811494.1 3875272..3875706(-) (nucA/comI) [Bacillus thuringiensis strain HS18-1]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATCGCAATCCTGTCTATTTTAGTAGCAGTCTATGAAGTACTTGTGCC
AGAGGAAACAAGTGTAAAGAAAACGAATACGTATGATCAAGTGTTAGAATTTCCGAAAGAACGTTATCCAGAGACAGGAA
AACATATTACGGATGCTATAAAAGAAGGGCATTCAGAAGTTTGTACAATCGATCGTGGTGGTGCTGCAGATAGAAGGAAA
TTGTCGTTAGCACCATATCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCAATGTGCAAGGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCGGCGGATAACCGCGGAGCAGGCTCTTGGGTAGGGAATAAGTTAGATAAATATC
CAGATGGTACGCGTGTGAAGTTTGAAGTGAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

69.912

78.472

0.549

Multiple sequence alignment