Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AC241_RS19750 Genome accession   NZ_CP012099
Coordinates   3866105..3866563 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain HS18-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3861105..3871563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC241_RS19735 (AC241_19750) - 3861768..3862004 (+) 237 WP_000283738.1 hypothetical protein -
  AC241_RS19740 (AC241_19755) - 3862172..3864280 (-) 2109 WP_016080441.1 polyphosphate kinase -
  AC241_RS19745 (AC241_19760) - 3864389..3865963 (-) 1575 WP_043937821.1 Ppx/GppA family phosphatase -
  AC241_RS19750 (AC241_19765) kre 3866105..3866563 (+) 459 WP_000804864.1 YkyB family protein Regulator
  AC241_RS19755 (AC241_19770) - 3866595..3867257 (-) 663 WP_016080439.1 YkyA family protein -
  AC241_RS19760 (AC241_19775) - 3867871..3868524 (-) 654 WP_016080438.1 diguanylate cyclase domain-containing protein -
  AC241_RS19765 (AC241_19780) - 3868689..3868949 (+) 261 WP_230690607.1 phage holin -
  AC241_RS19770 (AC241_19785) - 3868905..3869405 (-) 501 WP_016080436.1 hypothetical protein -
  AC241_RS19775 (AC241_19790) - 3869818..3871359 (+) 1542 WP_029443156.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=151395 AC241_RS19750 WP_000804864.1 3866105..3866563(+) (kre) [Bacillus thuringiensis strain HS18-1]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=151395 AC241_RS19750 WP_000804864.1 3866105..3866563(+) (kre) [Bacillus thuringiensis strain HS18-1]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAACCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACAAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment