Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   AC241_RS06070 Genome accession   NZ_CP012099
Coordinates   1175500..1176183 (+) Length   227 a.a.
NCBI ID   WP_050842866.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain HS18-1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1170500..1181183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC241_RS06050 (AC241_06045) - 1173239..1173442 (-) 204 WP_000559971.1 hypothetical protein -
  AC241_RS06060 (AC241_06055) spx 1174036..1174431 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  AC241_RS06065 (AC241_06060) - 1174481..1175155 (-) 675 WP_029442139.1 TerC family protein -
  AC241_RS06070 (AC241_06065) mecA 1175500..1176183 (+) 684 WP_050842866.1 adaptor protein MecA Regulator
  AC241_RS06075 (AC241_06070) - 1176256..1177800 (+) 1545 WP_029442140.1 cardiolipin synthase -
  AC241_RS06080 (AC241_06075) - 1177881..1179125 (+) 1245 WP_050842868.1 competence protein CoiA -
  AC241_RS06085 (AC241_06080) pepF 1179177..1181003 (+) 1827 WP_029442141.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27010.06 Da        Isoelectric Point: 3.9822

>NTDB_id=151380 AC241_RS06070 WP_050842866.1 1175500..1176183(+) (mecA) [Bacillus thuringiensis strain HS18-1]
MDIERINDYTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=151380 AC241_RS06070 WP_050842866.1 1175500..1176183(+) (mecA) [Bacillus thuringiensis strain HS18-1]
TTGGATATTGAAAGAATTAATGATTATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTTCAACAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGCAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.825

100

0.551


Multiple sequence alignment