Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   A3772_RS09710 Genome accession   NZ_CP015004
Coordinates   1899476..1901479 (+) Length   667 a.a.
NCBI ID   WP_003245397.1    Uniprot ID   P45694
Organism   Bacillus subtilis strain SZMC 6179J isolate B23     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1894476..1906479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A3772_RS09670 (A3772_09670) pghL 1894836..1895594 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  A3772_RS09675 (A3772_09675) - 1895621..1896070 (-) 450 WP_003245454.1 YndM family protein -
  A3772_RS09680 (A3772_09680) fosM 1896278..1896712 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  A3772_RS23040 - 1896621..1896917 (+) 297 WP_223257629.1 hypothetical protein -
  A3772_RS09690 (A3772_09690) dinR/lexA 1897254..1897871 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  A3772_RS09695 (A3772_09695) yneA 1898021..1898338 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  A3772_RS09700 (A3772_09700) dinL 1898357..1899010 (+) 654 WP_003231596.1 YneB family resolvase-like protein -
  A3772_RS09705 (A3772_09705) ynzC 1899074..1899307 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  A3772_RS09710 (A3772_09710) recP/tkt 1899476..1901479 (+) 2004 WP_003245397.1 transketolase Machinery gene
  A3772_RS09715 (A3772_09715) sirA 1901632..1902078 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  A3772_RS09720 (A3772_09720) yneF 1902164..1902382 (+) 219 WP_003221221.1 YneF family protein -
  A3772_RS09725 (A3772_09725) ynzD 1902456..1902629 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  A3772_RS09730 (A3772_09730) ccdA 1902849..1903556 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  A3772_RS09735 (A3772_09735) yneI 1903645..1904007 (+) 363 WP_003245707.1 response regulator -
  A3772_RS09740 (A3772_09740) yneJ 1904086..1904577 (+) 492 WP_010886519.1 CcdC family protein -
  A3772_RS09745 (A3772_09745) yneK 1904608..1905036 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  A3772_RS09750 (A3772_09750) cotM 1905270..1905662 (-) 393 WP_010886520.1 outer spore coat protein CotM -
  A3772_RS09755 (A3772_09755) sspP 1905743..1905889 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  A3772_RS09760 (A3772_09760) sspO 1905921..1906067 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72344.44 Da        Isoelectric Point: 4.7291

>NTDB_id=151105 A3772_RS09710 WP_003245397.1 1899476..1901479(+) (recP/tkt) [Bacillus subtilis strain SZMC 6179J isolate B23]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAVAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTSEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=151105 A3772_RS09710 WP_003245397.1 1899476..1901479(+) (recP/tkt) [Bacillus subtilis strain SZMC 6179J isolate B23]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAAGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGTAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGTTTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCGGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACATCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P45694

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562


Multiple sequence alignment