Detailed information    

insolico Bioinformatically predicted

Overview

Name   rec2   Type   Machinery gene
Locus tag   ADJ80_RS08810 Genome accession   NZ_CP012067
Coordinates   1911467..1913896 (+) Length   809 a.a.
NCBI ID   WP_050693791.1    Uniprot ID   -
Organism   Aggregatibacter aphrophilus strain W10433     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1906467..1918896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ADJ80_RS08790 (ADJ80_08810) - 1907676..1908476 (+) 801 WP_050693789.1 M15 family metallopeptidase -
  ADJ80_RS08795 (ADJ80_08815) folK 1908665..1909171 (-) 507 WP_050693790.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  ADJ80_RS08800 (ADJ80_08820) pcnB 1909164..1910618 (-) 1455 WP_205651028.1 polynucleotide adenylyltransferase PcnB -
  ADJ80_RS08805 (ADJ80_08825) dksA 1910736..1911173 (-) 438 WP_005556693.1 RNA polymerase-binding protein DksA -
  ADJ80_RS08810 (ADJ80_08830) rec2 1911467..1913896 (+) 2430 WP_050693791.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ADJ80_RS08815 (ADJ80_08835) msbA 1913941..1915689 (+) 1749 WP_050693792.1 lipid A ABC transporter ATP-binding protein/permease MsbA -
  ADJ80_RS08820 (ADJ80_08840) lpxK 1915708..1916685 (+) 978 WP_050693793.1 tetraacyldisaccharide 4'-kinase -
  ADJ80_RS08825 (ADJ80_08845) - 1916784..1916963 (+) 180 WP_050694206.1 Trm112 family protein -
  ADJ80_RS08830 (ADJ80_08850) kdsB 1916965..1917738 (+) 774 WP_050693794.1 3-deoxy-manno-octulosonate cytidylyltransferase -

Sequence

Protein


Download         Length: 809 a.a.        Molecular weight: 91968.82 Da        Isoelectric Point: 9.6773

>NTDB_id=151032 ADJ80_RS08810 WP_050693791.1 1911467..1913896(+) (rec2) [Aggregatibacter aphrophilus strain W10433]
MNISLDKFAGTLIFSGLTLLFLPDKWLLSWQVALYIFLPLLFITLLCYCLKLTKLLTLLTYLLLFLAQLVYVHFPALSLL
KQADNIANLPKILHTEFTVQEVLNQQDFQTVVITAKLAEDLPEQRIYAQWKAPQIVQIGERYEGDLRLRPISSRLNFNGF
DRQQWYFGKHISAWASVQSAVKIENVFSWRQTALNNALKQTENLSQQGLLLALGFGERAWLDNETWQIYQKTNTAHLIAI
SGLHIGLAMLLGYGLARLLQFFLPTRYLTPTLPILCGLLFALLYSQLAGMAIPTLRAMVALVILYVIQGLRLYWTPWRLL
WRVLALLILIDPLMLLSTSFWLSVSAVTSLMIWYQFFPLSLLQWRQLSLTHSPWHKVRWIFSLFHLQLGLLWLFTPIQLF
FFNGLSLNGFIANLIAVPIYSLLLVPLVLFAVFTQGALYSWQAANNLSEKITALLAYGQDGWLTVSLQQSLWLTLLLTIA
FLSALHFVYKAPKPIASPIELAKQSRNKGFHLNPARKLDLGLPIKAYAIGGGLVVFCITSLIYLSISRPHWQLETLDVGQ
GLATLIVKNGKGVLYDTGPSWNGGSMARLEILPYLQREGIELDWLIISHDDNDHAGGAKDILAAYPTVKFVSPSNKIYGE
KNDRKIDRTLCQTGEKWHWQGLSFSVLSPDNIVPRAENKDSCTLLLSDGQHQILLTGDADLGVEYKILPKLEKIDVLQVG
HHGSKTSTGEALVRQKEPKIALISSGRWNPWYFPHKDVVARLRRQNTQIYNTAEHGQIRLLFQDNEIKIQTARTEFSPWY
RRLIGLQTK

Nucleotide


Download         Length: 2430 bp        

>NTDB_id=151032 ADJ80_RS08810 WP_050693791.1 1911467..1913896(+) (rec2) [Aggregatibacter aphrophilus strain W10433]
ATGAATATTTCGTTAGATAAATTTGCCGGCACACTGATTTTCAGTGGGTTAACACTATTATTTTTGCCCGATAAATGGCT
TTTATCGTGGCAGGTTGCATTGTATATTTTCCTCCCGTTACTATTTATAACGTTACTTTGTTACTGCTTAAAATTAACCA
AGTTGTTAACGCTACTCACCTATTTATTGCTGTTTCTTGCCCAGCTGGTTTATGTGCATTTCCCTGCCCTGTCACTGCTC
AAACAAGCGGACAACATTGCCAATTTGCCAAAAATCCTTCACACTGAATTCACCGTACAAGAAGTGTTGAACCAACAAGA
TTTTCAAACTGTAGTCATTACCGCCAAACTCGCCGAAGACTTACCGGAACAACGTATTTATGCTCAATGGAAAGCGCCAC
AAATCGTGCAAATCGGCGAACGTTATGAGGGCGATTTACGTCTGCGCCCAATATCGTCCCGTTTAAACTTTAACGGCTTC
GACCGCCAACAATGGTATTTCGGCAAACACATTAGCGCATGGGCAAGCGTGCAAAGTGCGGTCAAAATAGAAAACGTTTT
TTCGTGGCGACAAACGGCTCTCAATAACGCCCTAAAACAAACGGAAAATCTATCCCAACAAGGCTTGCTATTAGCCCTTG
GTTTTGGCGAACGCGCATGGTTAGACAACGAAACTTGGCAAATTTATCAAAAAACTAATACGGCACATTTAATCGCCATT
TCAGGCTTGCATATCGGCCTTGCCATGTTGCTAGGATATGGCTTGGCACGCCTACTGCAATTTTTTCTGCCAACCCGTTA
TCTCACACCGACATTGCCGATACTATGCGGTTTGCTATTTGCCTTGCTTTATAGTCAGTTGGCGGGCATGGCAATTCCCA
CCCTGCGCGCCATGGTTGCCCTCGTTATTCTCTATGTTATTCAAGGCCTAAGGCTATACTGGACGCCATGGCGTTTATTG
TGGCGGGTGTTGGCATTATTGATTTTGATCGATCCGCTTATGTTGCTTTCCACCAGTTTCTGGCTGTCCGTCAGCGCCGT
CACAAGTTTGATGATTTGGTATCAATTTTTTCCGCTATCGCTATTACAATGGCGCCAGTTATCCCTTACCCATTCACCAT
GGCACAAAGTGCGGTGGATTTTTTCGCTGTTTCATCTGCAATTGGGGCTGTTATGGTTGTTTACCCCAATTCAACTTTTC
TTTTTTAACGGACTCTCTTTAAATGGCTTTATAGCCAATTTAATCGCCGTGCCCATATACAGCCTTTTGTTGGTTCCCTT
AGTGTTGTTTGCCGTATTCACCCAAGGCGCCTTGTATTCATGGCAGGCCGCTAATAATTTATCGGAAAAAATCACCGCAC
TTTTGGCTTATGGGCAAGACGGATGGCTCACGGTTTCACTTCAACAAAGTTTATGGCTAACGCTTTTGCTCACGATTGCG
TTTTTAAGCGCATTACATTTTGTTTATAAAGCCCCGAAACCTATCGCATCCCCCATCGAATTAGCCAAACAATCCCGTAA
TAAAGGATTTCACTTAAACCCCGCGCGTAAACTTGATTTAGGGTTACCAATCAAGGCGTATGCCATTGGCGGCGGATTAG
TAGTGTTTTGCATTACTTCATTGATTTACCTTTCAATTTCACGCCCTCATTGGCAATTAGAAACCTTAGATGTAGGGCAA
GGGCTCGCCACATTAATCGTTAAAAATGGCAAAGGCGTGCTCTATGACACCGGCCCAAGTTGGAACGGCGGCAGCATGGC
AAGATTAGAAATTTTGCCTTATTTACAGCGGGAAGGTATTGAACTTGATTGGTTGATCATAAGCCATGATGACAACGATC
ACGCCGGCGGAGCAAAAGATATTTTAGCGGCATACCCGACAGTGAAATTCGTTAGCCCGTCAAACAAAATCTATGGAGAA
AAAAACGATCGCAAAATTGACCGCACTTTGTGCCAAACCGGCGAAAAATGGCATTGGCAAGGATTAAGTTTCTCCGTACT
CTCTCCTGATAATATCGTGCCAAGGGCGGAAAATAAGGATTCTTGCACACTATTACTAAGTGATGGACAACATCAAATTT
TACTCACAGGCGACGCGGATCTTGGGGTGGAATATAAGATCTTGCCAAAACTTGAGAAGATCGATGTGTTACAGGTGGGA
CACCATGGCAGTAAAACCTCAACCGGTGAAGCATTGGTACGACAAAAGGAACCTAAGATCGCGCTAATTTCCAGCGGACG
TTGGAATCCTTGGTATTTTCCCCACAAAGACGTGGTTGCTCGTTTAAGACGACAAAATACACAAATTTATAACACGGCGG
AACACGGACAAATCCGTTTATTGTTTCAGGATAACGAGATAAAAATTCAAACTGCGCGGACAGAATTTTCGCCGTGGTAT
CGCAGATTAATTGGCTTACAGACGAAATAA

Domains

Predicted by InterproScan.

Domain of unknown function (DUF4131) (DUF4131)

(30-180)

Metallo-beta-lactamase superfamily (Lactamase_B)

(557-746)

Competence protein (Competence)

(213-485)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rec2 Haemophilus influenzae Rd KW20

53.846

96.415

0.519

Multiple sequence alignment