Detailed information NTG0150822

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PA8281_RS00135
• Genome accession: NZ_CP015002
• Coordinates: 28737..29762 (+)
• Length: 341 a.a.
• NCBI ID: WP_019725668.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PA8281
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 23737..34762

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PA8281_RS00110 (PA8281_06242)	-	23925..24242 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
PA8281_RS00115 (PA8281_06241)	trkA	24391..25764 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
PA8281_RS00120 (PA8281_06240)	rsmB	25792..27096 (-)	1305	WP_016561456.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PA8281_RS00125 (PA8281_06239)	fmt	27093..28037 (-)	945	WP_019725667.1	methionyl-tRNA formyltransferase	-
PA8281_RS00130 (PA8281_06238)	def	28092..28598 (-)	507	WP_003107059.1	peptide deformylase	-
PA8281_RS00135 (PA8281_06237)	tsaP	28737..29762 (+)	1026	WP_019725668.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PA8281_RS00140 (PA8281_06236)	dprA	29897..30985 (+)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
PA8281_RS00145 (PA8281_06235)	-	31026..31583 (+)	558	WP_016561457.1	L-threonylcarbamoyladenylate synthase	-
PA8281_RS00150 (PA8281_06234)	-	31593..32570 (-)	978	WP_016561458.1	NADPH:quinone reductase	-
PA8281_RS00155 (PA8281_06233)	hemF	32761..33678 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PA8281_RS00160 (PA8281_06232)	aroE	33736..34560 (+)	825	WP_003111201.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37555.98 Da
• Isoelectric Point: 9.3358

>NTDB_id=150822 PA8281_RS00135 WP_019725668.1 28737..29762(+) (tsaP) [Pseudomonas aeruginosa strain PA8281]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDALSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=150822 PA8281_RS00135 WP_019725668.1 28737..29762(+) (tsaP) [Pseudomonas aeruginosa strain PA8281]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACGCCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393