Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ABM34_RS03230 Genome accession   NZ_CP012034
Coordinates   630219..631487 (-) Length   422 a.a.
NCBI ID   WP_048703310.1    Uniprot ID   A0A0H4QFD9
Organism   Companilactobacillus ginsenosidimutans strain EMML 3041     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 625219..636487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABM34_RS03225 (ABM34_03230) - 628490..630202 (-) 1713 WP_048703309.1 proline--tRNA ligase -
  ABM34_RS03230 (ABM34_03235) eeP 630219..631487 (-) 1269 WP_048703310.1 RIP metalloprotease RseP Regulator
  ABM34_RS03235 (ABM34_03240) - 631507..632301 (-) 795 WP_048703313.1 phosphatidate cytidylyltransferase -
  ABM34_RS03240 (ABM34_03245) - 632319..633062 (-) 744 WP_048703315.1 isoprenyl transferase -
  ABM34_RS03245 (ABM34_03250) frr 633083..633643 (-) 561 WP_048703318.1 ribosome recycling factor -
  ABM34_RS03250 (ABM34_03255) pyrH 633644..634372 (-) 729 WP_048703321.1 UMP kinase -
  ABM34_RS03255 (ABM34_03260) tsf 634550..635428 (-) 879 WP_048703323.1 translation elongation factor Ts -
  ABM34_RS03260 (ABM34_03265) rpsB 635485..636279 (-) 795 WP_048703326.1 30S ribosomal protein S2 -

Sequence


Protein


Download         Length: 422 a.a.        Molecular weight: 45961.37 Da        Isoelectric Point: 9.4623

>NTDB_id=150705 ABM34_RS03230 WP_048703310.1 630219..631487(-) (eeP) [Companilactobacillus ginsenosidimutans strain EMML 3041]
MTAIITFIIVFGILVIVHEFGHYYAAKKSGILVREFSVGMGPKIVAYRKNSTTYTLRLLPLGGYVRMAGAQDDDSEIKPG
TMSSLVVGENNKVTKIIISSKVYEANAVPVQISKADLVDELFIEGFENGDESETKRFDVDHDATIVEDDGTEVQIAPRDV
QLQSVSVWKRMITNFAGPFNNFVLAILCSILAAFMMGSVSTNSNQLGVIQKDSVAQQAGLKENDIITKVNGNKTSNWMEL
ATAIQKNPGKKIDLTVKSHGNTRSVSVVPKTQKSNGQKYGMLGVQSQRDYSLGAKFKFGFTSSIQTTQAIFSQLGKMLTG
GFNINQLAGPVGIYSMTSQAASMGVITVIQFMAMLSLNLGIVNLIPIPALDGGKIVMNIIEAIRRKPIPEQYETVVSLIG
VGILVVLMVAVTWNDIQRFFIK

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=150705 ABM34_RS03230 WP_048703310.1 630219..631487(-) (eeP) [Companilactobacillus ginsenosidimutans strain EMML 3041]
ATGACCGCGATAATAACATTTATAATAGTTTTTGGTATTCTGGTGATTGTTCATGAGTTTGGACATTACTACGCTGCCAA
AAAATCAGGAATTTTAGTACGTGAATTTTCAGTCGGAATGGGTCCGAAAATTGTGGCGTACAGAAAAAATAGTACGACAT
ATACCTTAAGATTGTTACCTCTCGGAGGTTACGTCCGAATGGCTGGAGCTCAAGACGATGATTCTGAGATAAAGCCAGGT
ACCATGTCTTCTTTAGTTGTGGGCGAAAATAATAAGGTCACGAAGATAATTATCTCTAGCAAGGTTTATGAGGCCAATGC
TGTTCCGGTACAAATTTCCAAGGCCGATTTAGTCGATGAATTATTCATTGAAGGTTTTGAAAATGGTGATGAATCTGAAA
CAAAGAGATTTGATGTTGATCACGATGCAACGATTGTCGAAGACGACGGTACAGAAGTTCAAATTGCGCCACGTGATGTT
CAACTTCAATCTGTTTCCGTCTGGAAGAGAATGATAACTAACTTTGCTGGTCCATTTAATAATTTTGTGCTAGCAATCCT
TTGTTCAATCCTTGCTGCTTTTATGATGGGATCAGTTTCTACTAATTCTAATCAATTAGGTGTGATACAAAAAGACAGTG
TTGCTCAACAAGCAGGGCTGAAAGAAAATGATATTATCACTAAAGTTAATGGGAATAAAACCAGCAACTGGATGGAACTT
GCTACAGCAATTCAAAAGAATCCAGGAAAGAAAATAGATCTTACTGTAAAATCTCATGGGAATACGAGATCTGTATCTGT
TGTCCCTAAAACTCAAAAAAGTAATGGGCAAAAATATGGAATGCTTGGTGTTCAGAGTCAGAGAGATTACAGTTTAGGTG
CAAAATTCAAATTTGGTTTCACATCTAGTATTCAAACCACTCAAGCCATTTTTTCTCAATTAGGTAAAATGCTTACGGGT
GGATTTAACATCAATCAATTGGCTGGACCGGTTGGTATTTATTCCATGACATCCCAAGCTGCATCGATGGGAGTTATTAC
GGTAATTCAGTTTATGGCAATGTTGTCGCTGAATCTAGGTATTGTTAACTTGATTCCGATTCCAGCACTTGATGGTGGGA
AAATTGTTATGAACATAATCGAGGCAATCAGAAGAAAGCCAATTCCAGAGCAATATGAGACTGTTGTATCATTAATCGGG
GTAGGTATTTTAGTAGTATTAATGGTCGCAGTTACGTGGAACGATATTCAAAGATTCTTTATAAAATAG

Domains


Predicted by InterproScan.

(6-407)

(209-257)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H4QFD9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.18

100

0.498

  eeP Streptococcus thermophilus LMD-9

48.946

100

0.495


Multiple sequence alignment