Detailed information NTG0150560

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: VT05_RS09130
• Genome accession: NZ_CP012026
• Coordinates: 1695660..1698647 (-)
• Length: 995 a.a.
• NCBI ID: WP_017146945.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain FA19
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1690660..1703647

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VT05_RS09110 (VT05_01735)	-	1690747..1691973 (+)	1227	WP_003692100.1	PilT/PilU family type 4a pilus ATPase	-
VT05_RS09115 (VT05_01736)	yccS	1692090..1694240 (+)	2151	WP_003694501.1	YccS family putative transporter	-
VT05_RS09120 (VT05_01737)	-	1694724..1695008 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
VT05_RS09130 (VT05_01738)	pilC	1695660..1698647 (-)	2988	WP_017146945.1	PilC family type IV pilus tip adhesin	Machinery gene
VT05_RS09135 (VT05_01739)	-	1699609..1699872 (+)	264	WP_017147189.1	hypothetical protein	-
VT05_RS09140 (VT05_01740)	gnd	1699952..1701400 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
VT05_RS09145 (VT05_01741)	waaA	1701463..1702734 (+)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
VT05_RS09150 (VT05_01742)	-	1702775..1703224 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 995 a.a.
• Molecular weight: 109000.63 Da
• Isoelectric Point: 9.7349

>NTDB_id=150560 VT05_RS09130 WP_017146945.1 1695660..1698647(-) (pilC) [Neisseria gonorrhoeae strain FA19]
MNERKQPEVKWEGQYNQSALKDKSRERTFSHTSQKNDLGITSNFISFNNNDELVSQQSGTAVFGTATYLPPYGKVSGFDT
DRLKERANAAGWIRTTRPGLAGYSYADVVCRDITGCPKLVYETKFTFGQQGLQRKAGNKLDIYEDKSRENSPIYKLKDHP
WLGVSFNLGSENTVKNSKSFNKLISFFSEDNNNQNIVSTTRDHPISLGDSKREHTAVAYYLNAKLHLLDKKEIKDIAPGK
TVDLGTLRPRVETIGRGLLDFWATWKIEDKGNITVRLGLPEVKAGRCTNAAHPNPKVKPLSPALTAPALWFGPAQNGKVQ
MYSASVSTYPGSSSSKIFLQNLSRNDDKNKPGRYSLKPLSENEIKSKEPSFMGRQTIIRLDSGVQLIKLNGSKDEVVTFG
NTGNNGTFGIVKEANVNLEADEWKKVLLPWTVRGPDNDNKFKSINREPGKYSQRYRIRENGNRDLGDIVNSPIVAVGGYL
ATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTMPRKDIESNDSTLAKELRAFAEKGYVGDRYGVDGGFVLRSITDDQDR
QKHFFMFGAMGLGGRGAYALDLTKIDSSNPAGVSMFDVQNDKNNNNNKNDSNRVKLGYTVGTPQIGKTRSGKYAAFLASG
YAAKDINSNDNKTALYVYDLENTGGKLIKTIQVSGGTGGLSSPTLVDKDLDGTVDIAYAGDRGGKMYRFDLSNSDPSKWS
VSTIFEGAKPITSAPAVSRLADKRVVIFGTGSDLSEEDVVGKDQQYIYGIFDDDKPTVKVTVQNGMGGGLLEQNLTQENK
TLFLSNNKASGGSADKGWVVKLMDGERVTVKPIVVLRTAFVTIRSYTGNDKCGAQTAILGINTADGGALTPRSARPIVPD
NQVAQYSGHKTAGGKSVPIGCMWKNSKTVCPNGYVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCF
SGKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 2988 bp

>NTDB_id=150560 VT05_RS09130 WP_017146945.1 1695660..1698647(-) (pilC) [Neisseria gonorrhoeae strain FA19]
ATGAACGAGCGAAAGCAGCCCGAGGTAAAGTGGGAGGGTCAATATAATCAATCAGCATTAAAGGACAAAAGCAGGGAGCG
GACATTTAGCCATACGAGCCAGAAAAACGACCTCGGCATCACAAGCAATTTTATCTCATTCAACAATAACGATGAGCTTG
TTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATACC
GATAGGCTGAAAGAGCGCGCCAATGCCGCCGGTTGGATTCGTACCACCCGGCCCGGGCTGGCAGGCTACAGCTACGCCGA
TGTCGTATGCAGAGACATCACAGGCTGTCCCAAACTTGTCTATGAGACCAAATTTACCTTCGGTCAACAAGGGTTGCAAA
GAAAGGCAGGCAACAAGCTGGATATATACGAAGACAAAAGCCGCGAAAATTCGCCCATTTACAAATTGAAGGATCATCCC
TGGTTGGGCGTGTCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATAGCAAATCATTCAACAAATTGATATCTTTTTT
TAGTGAAGACAATAATAATCAAAACATCGTCTCTACGACACGAGACCACCCTATTTCCCTTGGCGACTCGAAGCGCGAAC
ATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGATAAAAAAGAGATTAAAGATATCGCGCCAGGCAAA
ACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGACGATAGGACGAGGCTTGCTAGATTTTTGGGCTACGTGGAAGAT
TGAAGATAAAGGGAACATTACAGTCCGCCTCGGCCTGCCGGAAGTCAAAGCCGGGCGCTGCACCAACGCCGCCCACCCCA
ATCCCAAGGTCAAACCCCTTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGCCCTGCGCAAAATGGCAAGGTGCAG
ATGTATTCCGCTTCGGTTTCTACCTACCCCGGCAGCTCGAGCAGCAAAATTTTCCTGCAAAACCTTTCCCGCAATGATGA
CAAAAACAAACCGGGCCGCTATTCCCTCAAACCCTTGAGTGAGAATGAGATTAAAAGTAAAGAGCCGAGTTTCATGGGGC
GGCAAACAATCATCCGATTGGATAGCGGCGTACAGCTGATCAAACTGAATGGAAGCAAGGATGAGGTCGTCACTTTTGGA
AACACCGGCAACAACGGCACTTTCGGCATTGTTAAGGAAGCGAACGTCAATCTTGAAGCCGACGAGTGGAAAAAAGTGCT
GCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAATTTAAATCAATTAACCGAGAACCAGGCAAATACAGCCAAA
GATACCGCATCCGCGAAAACGGCAATCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATTTG
GCAACCGCCGCCAACGACGGGATGGTGCATATCTTCAAAAAAAACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCT
CAGCTACATCCCCGGAACGATGCCGCGCAAGGATATTGAAAGCAACGATTCTACACTCGCCAAAGAGCTGCGCGCCTTTG
CCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCAGCATTACAGATGACCAAGACAGG
CAAAAACATTTCTTTATGTTCGGCGCAATGGGCCTGGGCGGCAGAGGCGCATACGCCTTGGATTTGACCAAAATCGACAG
CAGCAACCCGGCCGGCGTTTCCATGTTTGATGTCCAAAACGACAAAAATAACAATAACAATAAGAATGACAGTAATCGCG
TGAAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAACCCGCAGCGGCAAATACGCCGCCTTCCTCGCCTCCGGT
TATGCGGCTAAAGACATTAACAGCAACGACAATAAAACCGCGCTGTATGTGTATGATTTGGAAAACACCGGTGGTAAACT
GATTAAAACAATCCAAGTATCCGGCGGCACAGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGG
TCGATATCGCCTATGCCGGCGACCGGGGCGGGAAGATGTACCGCTTTGATTTGAGCAATTCCGATCCTAGTAAATGGTCT
GTAAGCACTATTTTCGAAGGCGCAAAACCGATTACTTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTTAT
CTTCGGCACGGGCAGCGATTTGAGTGAAGAGGATGTAGTCGGTAAGGATCAACAATATATTTACGGTATCTTTGACGACG
ATAAGCCGACGGTTAAGGTAACGGTACAAAACGGCATGGGAGGCGGGCTGCTCGAGCAAAACCTTACGCAGGAAAATAAA
ACCTTGTTCCTGAGCAATAATAAGGCATCCGGCGGATCGGCCGATAAAGGCTGGGTAGTGAAATTGATGGACGGAGAACG
CGTTACCGTCAAACCGATCGTGGTATTGCGTACCGCCTTTGTCACCATCCGTAGCTATACGGGTAATGACAAATGCGGCG
CGCAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGAT
AACCAGGTTGCGCAATATTCCGGCCATAAGACAGCCGGCGGCAAGTCCGTCCCCATAGGCTGCATGTGGAAAAACAGCAA
AACCGTCTGCCCGAACGGATATGTTTACGACAAGCCGGTTAATGTGCGTTACCTGGACGAAAAGAAAACAGACGATTTCC
CCGTCACGGCAGACGGTGATGCAGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTC
TCCGGAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACG
CTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (465-808)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	71.739	100	0.73