Detailed information NTG0150394

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: B14_RS16465
• Genome accession: NZ_CP014842
• Coordinates: 3175534..3176652 (-)
• Length: 372 a.a.
• NCBI ID: WP_073411624.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SCDB 14
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3170534..3181652

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B14_RS16440 (B14_03291)	-	3171243..3172469 (-)	1227	WP_009328954.1	metallophosphoesterase family protein	-
B14_RS16445 (B14_03292)	-	3172589..3173857 (-)	1269	WP_016886156.1	ABC transporter permease	-
B14_RS16450 (B14_03293)	-	3173850..3174746 (-)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
B14_RS16455 (B14_03294)	-	3174864..3175049 (+)	186	WP_003180228.1	YhzD family protein	-
B14_RS16460 (B14_03295)	-	3175124..3175402 (-)	279	WP_016886157.1	hypothetical protein	-
B14_RS22745 (B14_03296)	-	3175407..3175544 (-)	138	WP_016886158.1	hypothetical protein	-
B14_RS16465 (B14_03297)	rapC	3175534..3176652 (-)	1119	WP_073411624.1	Rap family tetratricopeptide repeat protein	Regulator
B14_RS16470 (B14_03298)	-	3176779..3177555 (-)	777	WP_016886160.1	enoyl-CoA hydratase	-
B14_RS16475 (B14_03299)	-	3177756..3178085 (+)	330	WP_016886161.1	hypothetical protein	-
B14_RS16480 (B14_03300)	-	3178150..3178647 (+)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
B14_RS16485 (B14_03301)	-	3178654..3179865 (+)	1212	WP_016886162.1	cation:proton antiporter	-
B14_RS16490 (B14_03302)	-	3179947..3181452 (-)	1506	WP_080623676.1	coproporphyrinogen III oxidase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43329.01 Da
• Isoelectric Point: 5.5287

>NTDB_id=150394 B14_RS16465 WP_073411624.1 3175534..3176652(-) (rapC) [Bacillus licheniformis strain SCDB 14]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLSILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=150394 B14_RS16465 WP_073411624.1 3175534..3176652(-) (rapC) [Bacillus licheniformis strain SCDB 14]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGCAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCAAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCGTCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAGCATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374