Detailed information NTG0150376

Bioinformatically predicted

Overview

• Name: fimT
• Type: Machinery gene
• Locus tag: lpt_RS03600
• Genome accession: NZ_CP012019
• Coordinates: 769938..770645 (-)
• Length: 235 a.a.
• NCBI ID: WP_072356081.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila strain Toronto-20052
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 764938..775645

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
lpt_RS03585 (lpt_03570)	-	767813..768325 (-)	513	WP_061784175.1	pilus assembly protein	-
lpt_RS03590 (lpt_03575)	-	768322..769389 (-)	1068	WP_061784176.1	PilW family protein	-
lpt_RS03595 (lpt_03580)	pilV	769386..769925 (-)	540	WP_061722134.1	type IV pilus modification protein PilV	-
lpt_RS03600 (lpt_03585)	fimT	769938..770645 (-)	708	WP_072356081.1	GspH/FimT family pseudopilin	Machinery gene
lpt_RS03605 (lpt_03590)	-	770869..771729 (-)	861	WP_061363866.1	polysaccharide deacetylase family protein	-
lpt_RS03610 (lpt_03595)	-	771906..773255 (-)	1350	WP_072356083.1	lpg0634 family Dot/Icm T4SS effector	-
lpt_RS03615 (lpt_03600)	-	773545..775026 (+)	1482	WP_027220495.1	glycosyltransferase family 39 protein	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 24851.44 Da
• Isoelectric Point: 7.0381

>NTDB_id=150376 lpt_RS03600 WP_072356081.1 769938..770645(-) (fimT) [Legionella pneumophila subsp. pneumophila strain Toronto-20052]
MNKVITESQKFTLRNLANMLFCVDGSVLPAQSNIAQKIQTQGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP

Nucleotide

• Length: 708 bp

>NTDB_id=150376 lpt_RS03600 WP_072356081.1 769938..770645(-) (fimT) [Legionella pneumophila subsp. pneumophila strain Toronto-20052]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACTTAGCTAATATGTTATTTTGCGTTGATGGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACGCAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTTTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTGTGCCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACACTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGAAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCTGGAACAACACCCGGTCAAGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (67-88)

• Type II transport protein GspH (GspH) (106-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimT	Legionella pneumophila strain Lp02	98.298	100	0.983