Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   B14_RS05545 Genome accession   NZ_CP014842
Coordinates   1100475..1101356 (+) Length   293 a.a.
NCBI ID   WP_021837675.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SCDB 14     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1095475..1106356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B14_RS05515 (B14_01104) - 1095833..1096384 (+) 552 WP_003184868.1 cysteine hydrolase family protein -
  B14_RS05520 (B14_01105) - 1096402..1097871 (+) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  B14_RS05525 (B14_01106) - 1098050..1099270 (+) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  B14_RS05530 (B14_01107) - 1099313..1099660 (-) 348 WP_231105863.1 SDR family oxidoreductase -
  B14_RS05540 (B14_01109) degQ 1100146..1100286 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  B14_RS05545 (B14_01110) comQ 1100475..1101356 (+) 882 WP_021837675.1 polyprenyl synthetase family protein Regulator
  B14_RS05550 (B14_01111) comX 1101365..1101529 (+) 165 WP_003184853.1 competence pheromone ComX -
  B14_RS05555 (B14_01112) comP 1101552..1103858 (+) 2307 WP_003184851.1 ATP-binding protein Regulator
  B14_RS05560 (B14_01113) comA 1103945..1104583 (+) 639 WP_003184849.1 response regulator transcription factor Regulator
  B14_RS05565 (B14_01114) - 1104600..1104989 (+) 390 WP_003184847.1 hotdog fold thioesterase -
  B14_RS05570 (B14_01115) mnhG 1105029..1105403 (-) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  B14_RS05575 (B14_01116) - 1105387..1105671 (-) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  B14_RS05580 (B14_01117) - 1105671..1106147 (-) 477 WP_003184840.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33390.10 Da        Isoelectric Point: 4.6179

>NTDB_id=150304 B14_RS05545 WP_021837675.1 1100475..1101356(+) (comQ) [Bacillus licheniformis strain SCDB 14]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINSSVAMNAATALYTISIKVIGSVSNDSCFFNKMMEYILQSSQGQHDDLSDKPVTENECLDMIKRKSGSLTALSCVLGT
MLATGKFNPTVESYALQLGIALQIENDYRGLFYNSKSDIVKNKRTLAYLYLKRKFNQSSIDLLKVFENEDKIADIEIKCY
KEKLKEAGVPQYMYVMIQLAIQKFRRGIAELELKQEEKKWLASFLLNKFDKED

Nucleotide


Download         Length: 882 bp        

>NTDB_id=150304 B14_RS05545 WP_021837675.1 1100475..1101356(+) (comQ) [Bacillus licheniformis strain SCDB 14]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACAGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
CGATTCTTGCTTTTTTAATAAAATGATGGAATACATATTGCAATCTTCACAAGGGCAACATGATGATCTTAGTGATAAGC
CGGTTACGGAAAACGAATGCCTTGATATGATCAAGCGCAAATCTGGTTCATTGACAGCTCTTTCATGTGTTTTGGGAACC
ATGCTCGCTACAGGTAAATTTAATCCTACTGTTGAATCTTATGCACTCCAATTGGGCATTGCTTTACAGATCGAAAATGA
TTATAGAGGTCTTTTCTATAATTCAAAAAGCGATATTGTGAAAAATAAGCGAACACTTGCTTATTTATACTTGAAAAGAA
AATTTAATCAATCCTCAATTGATTTATTAAAAGTATTTGAAAATGAGGATAAAATTGCCGATATAGAAATAAAATGTTAT
AAAGAAAAATTGAAGGAAGCTGGTGTTCCCCAATATATGTATGTCATGATTCAGCTTGCTATTCAGAAATTTAGAAGAGG
AATAGCTGAGTTAGAGCTGAAACAAGAGGAAAAGAAATGGCTTGCTTCTTTCCTTTTGAACAAGTTTGATAAGGAGGATT
AA

Domains


Predicted by InterProScan.

(41-230)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.291

98.635

0.437