Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   B14_RS00675 Genome accession   NZ_CP014842
Coordinates   124654..125502 (+) Length   282 a.a.
NCBI ID   WP_003178034.1    Uniprot ID   Q65CN8
Organism   Bacillus licheniformis strain SCDB 14     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 119654..130502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B14_RS00650 (B14_00127) rsmG 120566..121285 (+) 720 WP_003178044.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  B14_RS00655 (B14_00128) noc 121383..122234 (+) 852 WP_003178042.1 nucleoid occlusion protein -
  B14_RS00660 (B14_00129) - 122290..123147 (+) 858 WP_003178040.1 RNA polymerase sigma-70 factor -
  B14_RS00665 (B14_00130) - 123214..123657 (+) 444 WP_003178038.1 carboxymuconolactone decarboxylase family protein -
  B14_RS00670 (B14_00131) soj 123900..124661 (+) 762 WP_011201786.1 sporulation initiation inhibitor protein Soj -
  B14_RS00675 (B14_00132) spo0J 124654..125502 (+) 849 WP_003178034.1 ParB/RepB/Spo0J family partition protein Regulator
  B14_RS00680 (B14_00133) yyaC 125539..126156 (-) 618 WP_003178032.1 spore protease YyaC -
  B14_RS00685 (B14_00134) - 126460..127473 (+) 1014 WP_003178030.1 hypothetical protein -
  B14_RS00690 (B14_00135) - 127561..127767 (+) 207 WP_011201785.1 DUF951 domain-containing protein -
  B14_RS00700 (B14_00136) ychF 127946..129046 (+) 1101 WP_003178027.1 redox-regulated ATPase YchF -
  B14_RS00705 (B14_00137) rpsF 129160..129447 (+) 288 WP_003178026.1 30S ribosomal protein S6 -
  B14_RS00710 (B14_00138) ssbA 129494..130006 (+) 513 WP_003178024.1 single-stranded DNA-binding protein SsbA Machinery gene
  B14_RS00715 (B14_00139) rpsR 130058..130297 (+) 240 WP_003178022.1 30S ribosomal protein S18 -

Sequence


Protein


Download         Length: 282 a.a.        Molecular weight: 32283.41 Da        Isoelectric Point: 9.5628

>NTDB_id=150276 B14_RS00675 WP_003178034.1 124654..125502(+) (spo0J) [Bacillus licheniformis strain SCDB 14]
MPKGLGKGINALFSNVDLSEETVEEIKLQDLRPNPYQPRKTFDDQSLKDLKESILQHGVLQPIIVRKSIKGYDIVAGERR
FRAAEKAGLETIPAIVRELSESLMMEIALLENLQREDLSPLEEAKAYESLLKHLDMTQEQLAKRLGKSRPHIANHLRLLT
LPEDVQKLIDNGTLSMGHGRTLLGLKNKKKLEPLVQKVVSEQLNVRQLEKLIQQLNADVPRETKKPKQVKDAVIKERESY
LRNYFGTPVTIKKQKKKGRIEIEFYSNEDLERILELLAQEDA

Nucleotide


Download         Length: 849 bp        

>NTDB_id=150276 B14_RS00675 WP_003178034.1 124654..125502(+) (spo0J) [Bacillus licheniformis strain SCDB 14]
ATGCCTAAAGGTCTCGGAAAAGGGATTAATGCATTGTTTTCAAATGTTGATTTATCCGAAGAAACGGTTGAGGAAATCAA
GCTGCAAGACTTGCGGCCCAACCCTTATCAGCCAAGAAAAACGTTTGATGACCAATCGTTAAAAGATTTGAAGGAGTCCA
TTTTGCAGCACGGTGTTTTGCAGCCCATCATCGTCAGAAAGTCAATTAAAGGCTATGACATTGTGGCCGGAGAACGCCGT
TTCCGGGCTGCTGAAAAGGCCGGATTGGAAACCATTCCTGCGATTGTGCGCGAGCTGTCGGAATCCCTGATGATGGAGAT
TGCCCTATTGGAAAATCTTCAACGAGAAGACCTGTCTCCGCTTGAAGAAGCAAAAGCCTATGAATCTTTGCTCAAACATC
TCGATATGACCCAGGAACAGCTGGCGAAAAGGCTTGGAAAAAGCAGGCCTCACATCGCCAACCACTTGCGGCTGCTGACA
CTTCCTGAAGACGTTCAAAAGTTAATCGACAACGGCACGTTATCGATGGGCCATGGCCGAACATTGCTTGGATTGAAAAA
CAAGAAAAAGCTTGAGCCGCTTGTTCAAAAGGTCGTGTCCGAACAGTTGAACGTCCGCCAGTTGGAAAAGTTAATTCAAC
AGTTGAACGCTGATGTTCCACGTGAAACAAAGAAGCCGAAACAAGTCAAAGATGCAGTGATCAAGGAACGGGAATCGTAT
TTGCGAAACTATTTTGGAACACCGGTGACCATTAAAAAGCAAAAGAAAAAAGGCAGGATCGAAATCGAATTCTACTCAAA
TGAAGACTTGGAGCGTATTCTCGAATTATTGGCTCAAGAAGACGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65CN8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

43.462

92.199

0.401