Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | BaDB11_RS21660 | Genome accession | NZ_CP014795 |
| Coordinates | 4164054..4164416 (+) | Length | 120 a.a. |
| NCBI ID | WP_003181796.1 | Uniprot ID | A0A6I1MJA4 |
| Organism | Bacillus licheniformis strain SCK B11 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4159054..4169416
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BaDB11_RS21630 (BaDB11_04355) | flgD | 4159898..4160365 (+) | 468 | WP_003181782.1 | flagellar hook assembly protein FlgD | - |
| BaDB11_RS21635 (BaDB11_04356) | flgG | 4160393..4161184 (+) | 792 | WP_003181784.1 | flagellar basal body rod protein FlgG | - |
| BaDB11_RS21640 | - | 4161227..4161442 (+) | 216 | WP_003181786.1 | flagellar FlbD family protein | - |
| BaDB11_RS21645 (BaDB11_04357) | fliL | 4161439..4161870 (+) | 432 | WP_009328514.1 | flagellar basal body-associated protein FliL | - |
| BaDB11_RS21650 (BaDB11_04358) | fliM | 4161906..4162904 (+) | 999 | WP_003181789.1 | flagellar motor switch protein FliM | - |
| BaDB11_RS21655 (BaDB11_04359) | fliY | 4162894..4164027 (+) | 1134 | WP_003181794.1 | flagellar motor switch phosphatase FliY | - |
| BaDB11_RS21660 (BaDB11_04360) | pilH | 4164054..4164416 (+) | 363 | WP_003181796.1 | response regulator | Machinery gene |
| BaDB11_RS21665 (BaDB11_04361) | fliZ | 4164429..4165103 (+) | 675 | WP_009328513.1 | flagella biosynthesis regulatory protein FliZ | - |
| BaDB11_RS21670 (BaDB11_04362) | fliP | 4165096..4165761 (+) | 666 | WP_009328512.1 | flagellar type III secretion system pore protein FliP | - |
| BaDB11_RS21675 (BaDB11_04363) | fliQ | 4165777..4166046 (+) | 270 | WP_003181801.1 | flagellar biosynthesis protein FliQ | - |
| BaDB11_RS21680 (BaDB11_04364) | fliR | 4166054..4166830 (+) | 777 | WP_003181804.1 | flagellar biosynthetic protein FliR | - |
| BaDB11_RS21685 (BaDB11_04365) | flhB | 4166830..4167909 (+) | 1080 | WP_003181806.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13280.60 Da Isoelectric Point: 4.5762
>NTDB_id=150260 BaDB11_RS21660 WP_003181796.1 4164054..4164416(+) (pilH) [Bacillus licheniformis strain SCK B11]
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=150260 BaDB11_RS21660 WP_003181796.1 4164054..4164416(+) (pilH) [Bacillus licheniformis strain SCK B11]
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.136 |
98.333 |
0.375 |