Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SAHC1335_RS08670 | Genome accession | NZ_CP012012 |
| Coordinates | 1727821..1728120 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain HC1335 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1722821..1733120
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAHC1335_RS08645 (SAHC1335_02559) | gcvPA | 1724033..1725379 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SAHC1335_RS08650 (SAHC1335_02560) | gcvT | 1725399..1726490 (-) | 1092 | WP_000093351.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SAHC1335_RS08655 (SAHC1335_02561) | - | 1726649..1727173 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| SAHC1335_RS08660 | - | 1727163..1727309 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SAHC1335_RS08665 (SAHC1335_04005) | comGF | 1727406..1727903 (-) | 498 | WP_001803317.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SAHC1335_RS08670 (SAHC1335_05263) | comGE | 1727821..1728120 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SAHC1335_RS08675 (SAHC1335_02564) | comGD | 1728107..1728553 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SAHC1335_RS08680 (SAHC1335_02565) | comGC | 1728531..1728842 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SAHC1335_RS08685 (SAHC1335_02566) | comGB | 1728856..1729926 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SAHC1335_RS08690 (SAHC1335_02567) | comGA | 1729898..1730872 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SAHC1335_RS08695 (SAHC1335_02568) | - | 1730924..1731547 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| SAHC1335_RS08700 (SAHC1335_02569) | - | 1731544..1731873 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SAHC1335_RS08705 (SAHC1335_02570) | - | 1731873..1732859 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| SAHC1335_RS08710 (SAHC1335_05266) | - | 1732856..1733059 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=150222 SAHC1335_RS08670 WP_000844413.1 1727821..1728120(-) (comGE) [Staphylococcus aureus strain HC1335]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=150222 SAHC1335_RS08670 WP_000844413.1 1727821..1728120(-) (comGE) [Staphylococcus aureus strain HC1335]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |