Detailed information
Bioinformatically predicted
Overview
| Name | lrpC | Type | Machinery gene |
| Locus tag | BaDB11_RS15210 | Genome accession | NZ_CP014795 |
| Coordinates | 2916186..2916614 (+) | Length | 142 a.a. |
| NCBI ID | WP_003179050.1 | Uniprot ID | Q65N91 |
| Organism | Bacillus licheniformis strain SCK B11 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2911186..2921614
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BaDB11_RS15175 (BaDB11_03051) | - | 2911470..2911973 (+) | 504 | WP_003179036.1 | D-lyxose/D-mannose family sugar isomerase | - |
| BaDB11_RS15180 (BaDB11_03052) | - | 2911990..2912373 (-) | 384 | WP_003179038.1 | DUF2283 domain-containing protein | - |
| BaDB11_RS15185 (BaDB11_03053) | - | 2912459..2912881 (+) | 423 | WP_003179040.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| BaDB11_RS15190 (BaDB11_03054) | - | 2913334..2914143 (+) | 810 | WP_003179042.1 | lipid II flippase Amj family protein | - |
| BaDB11_RS15195 (BaDB11_03055) | - | 2914308..2915249 (+) | 942 | WP_003179044.1 | LCP family protein | - |
| BaDB11_RS15200 (BaDB11_03056) | - | 2915281..2915574 (-) | 294 | WP_003179046.1 | DUF3817 domain-containing protein | - |
| BaDB11_RS15205 (BaDB11_03057) | - | 2915658..2916068 (-) | 411 | WP_003179047.1 | carboxymuconolactone decarboxylase family protein | - |
| BaDB11_RS15210 (BaDB11_03058) | lrpC | 2916186..2916614 (+) | 429 | WP_003179050.1 | Lrp/AsnC family transcriptional regulator | Machinery gene |
| BaDB11_RS15215 (BaDB11_03059) | - | 2916688..2918871 (+) | 2184 | WP_025805960.1 | DNA topoisomerase III | - |
| BaDB11_RS15220 (BaDB11_03060) | - | 2919559..2921379 (+) | 1821 | WP_011197562.1 | APC family permease | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 16264.89 Da Isoelectric Point: 7.7014
>NTDB_id=150215 BaDB11_RS15210 WP_003179050.1 2916186..2916614(+) (lrpC) [Bacillus licheniformis strain SCK B11]
MKIDDLDFKIIAELKKDSRLSMRELGRKISLSAPSVTERVRRLESFGVIKKYTLDIDYQKVGLPVSCIIEATVKNGEYER
FKAYIERLPNIEFCYRIAGAACYMLKINAESLAKIEAFINETSPYAQTVTHVIFSEIETKES
MKIDDLDFKIIAELKKDSRLSMRELGRKISLSAPSVTERVRRLESFGVIKKYTLDIDYQKVGLPVSCIIEATVKNGEYER
FKAYIERLPNIEFCYRIAGAACYMLKINAESLAKIEAFINETSPYAQTVTHVIFSEIETKES
Nucleotide
Download Length: 429 bp
>NTDB_id=150215 BaDB11_RS15210 WP_003179050.1 2916186..2916614(+) (lrpC) [Bacillus licheniformis strain SCK B11]
ATGAAAATTGATGATCTCGATTTTAAAATCATAGCCGAATTAAAGAAAGACAGCCGTTTATCGATGCGGGAGCTGGGCAG
GAAGATCAGCCTTTCGGCACCGTCTGTGACCGAAAGAGTCAGGCGGCTCGAATCGTTCGGCGTCATAAAAAAATATACGC
TGGACATCGATTACCAAAAGGTCGGTCTTCCCGTTTCCTGCATCATTGAAGCAACGGTGAAAAACGGGGAATACGAGAGG
TTTAAAGCGTATATCGAACGCCTCCCGAACATTGAATTCTGCTACCGGATCGCGGGAGCTGCCTGCTATATGCTGAAAAT
CAATGCAGAGAGCCTGGCGAAGATCGAAGCGTTTATCAATGAAACGTCTCCATATGCCCAAACCGTGACACACGTGATTT
TTTCGGAAATTGAAACAAAGGAATCGTGA
ATGAAAATTGATGATCTCGATTTTAAAATCATAGCCGAATTAAAGAAAGACAGCCGTTTATCGATGCGGGAGCTGGGCAG
GAAGATCAGCCTTTCGGCACCGTCTGTGACCGAAAGAGTCAGGCGGCTCGAATCGTTCGGCGTCATAAAAAAATATACGC
TGGACATCGATTACCAAAAGGTCGGTCTTCCCGTTTCCTGCATCATTGAAGCAACGGTGAAAAACGGGGAATACGAGAGG
TTTAAAGCGTATATCGAACGCCTCCCGAACATTGAATTCTGCTACCGGATCGCGGGAGCTGCCTGCTATATGCTGAAAAT
CAATGCAGAGAGCCTGGCGAAGATCGAAGCGTTTATCAATGAAACGTCTCCATATGCCCAAACCGTGACACACGTGATTT
TTTCGGAAATTGAAACAAAGGAATCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lrpC | Bacillus subtilis subsp. subtilis str. 168 |
80 |
98.592 |
0.789 |