Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SAHC1340_RS15320 Genome accession   NZ_CP012011
Coordinates   2940026..2940691 (-) Length   221 a.a.
NCBI ID   WP_000697878.1    Uniprot ID   -
Organism   Staphylococcus aureus strain HC1340     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2935026..2945691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAHC1340_RS15295 - 2935479..2935592 (-) 114 WP_014937089.1 hypothetical protein -
  SAHC1340_RS15305 (SAHC1340_00502) - 2936268..2938268 (-) 2001 WP_000776744.1 ABC transporter permease -
  SAHC1340_RS15310 (SAHC1340_00503) - 2938265..2939020 (-) 756 WP_000923764.1 ABC transporter ATP-binding protein -
  SAHC1340_RS15315 (SAHC1340_00504) braS 2939128..2940015 (-) 888 WP_000143418.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SAHC1340_RS15320 (SAHC1340_00505) braR 2940026..2940691 (-) 666 WP_000697878.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SAHC1340_RS15325 (SAHC1340_00506) - 2940717..2940917 (-) 201 WP_000604727.1 hypothetical protein -
  SAHC1340_RS15335 (SAHC1340_00507) - 2941115..2942539 (+) 1425 WP_000953739.1 alkaline phosphatase -
  SAHC1340_RS17180 (SAHC1340_00508) - 2942597..2942698 (-) 102 WP_000731972.1 SE2200 family small protein -
  SAHC1340_RS15340 (SAHC1340_00509) - 2942820..2943275 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SAHC1340_RS15345 (SAHC1340_00510) - 2943520..2944281 (-) 762 WP_020444813.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25335.41 Da        Isoelectric Point: 4.6830

>NTDB_id=150202 SAHC1340_RS15320 WP_000697878.1 2940026..2940691(-) (braR) [Staphylococcus aureus strain HC1340]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLCKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=150202 SAHC1340_RS15320 WP_000697878.1 2940026..2940691(-) (braR) [Staphylococcus aureus strain HC1340]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGTGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991

Multiple sequence alignment