Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BaDB11_RS11870 Genome accession   NZ_CP014795
Coordinates   2236377..2237063 (-) Length   228 a.a.
NCBI ID   WP_080618560.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SCK B11     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2231377..2242063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BaDB11_RS11855 (BaDB11_02395) - 2232575..2234515 (-) 1941 WP_003177730.1 FtsX-like permease family protein -
  BaDB11_RS11860 (BaDB11_02396) - 2234505..2235266 (-) 762 WP_003177734.1 ABC transporter ATP-binding protein -
  BaDB11_RS11865 (BaDB11_02397) - 2235367..2236371 (-) 1005 WP_003177737.1 sensor histidine kinase -
  BaDB11_RS11870 (BaDB11_02398) braR 2236377..2237063 (-) 687 WP_080618560.1 response regulator transcription factor Regulator
  BaDB11_RS11875 (BaDB11_02399) - 2237174..2238583 (-) 1410 WP_003177741.1 glycoside hydrolase family 1 protein -
  BaDB11_RS11880 (BaDB11_02400) - 2238624..2240468 (-) 1845 WP_003177744.1 beta-glucoside-specific PTS transporter subunit IIABC -
  BaDB11_RS11885 (BaDB11_02401) - 2240924..2241340 (-) 417 WP_003177748.1 hypothetical protein -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26774.68 Da        Isoelectric Point: 5.0399

>NTDB_id=150193 BaDB11_RS11870 WP_080618560.1 2236377..2237063(-) (braR) [Bacillus licheniformis strain SCK B11]
MFKLLLIEDDESLFQEIKERLTGWSYEVYGINDFSEVMQEFAAIKPDCVIIDIQLPKYDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQFGADDYIQKPFHFDVLIAKIQAIFRRVYDYNTEPEILKKTWCDATVDPEQNRVSNKAGAIELTRNEMF
ILKQLIDQKNKIVSREELMRSLWNDERFVSDNTLTVNVNRLRKKLDALNLGQYIETKVGQGYMAKEEG

Nucleotide


Download         Length: 687 bp        

>NTDB_id=150193 BaDB11_RS11870 WP_080618560.1 2236377..2237063(-) (braR) [Bacillus licheniformis strain SCK B11]
ATGTTTAAACTGCTGTTGATAGAAGATGATGAATCGCTGTTTCAAGAAATAAAAGAGCGGTTAACCGGGTGGTCATACGA
GGTATACGGCATCAACGATTTCAGCGAAGTGATGCAGGAGTTTGCGGCGATTAAGCCAGACTGCGTCATCATCGATATTC
AGCTGCCTAAATATGACGGGTTTCATTGGTGCCGGCAGATCCGCTCCCGTTCCAACGTTCCGATTCTCTTTTTATCTTCG
CGCGATCATCCTGCTGATATGGTCATGTCCATGCAGTTCGGAGCGGATGATTATATTCAGAAGCCGTTTCATTTTGACGT
GCTGATTGCCAAGATCCAGGCGATTTTCCGTCGCGTCTACGACTATAATACAGAGCCTGAGATTCTTAAAAAAACGTGGT
GCGATGCAACCGTTGATCCCGAACAAAACCGCGTCAGCAATAAGGCGGGGGCGATCGAACTGACAAGGAATGAAATGTTC
ATTTTAAAACAATTGATCGACCAAAAAAACAAAATTGTCAGCAGGGAAGAATTGATGAGAAGCCTATGGAACGATGAACG
CTTTGTCAGCGATAACACGCTGACAGTCAACGTAAACCGCTTAAGAAAAAAACTCGATGCCTTGAACTTGGGGCAATATA
TCGAGACGAAGGTCGGCCAGGGCTATATGGCGAAAGAAGAAGGATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(152-223)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.271

96.93

0.39