Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BaDB11_RS09055 | Genome accession | NZ_CP014795 |
| Coordinates | 1661273..1661557 (-) | Length | 94 a.a. |
| NCBI ID | WP_003185421.1 | Uniprot ID | Q65EP9 |
| Organism | Bacillus licheniformis strain SCK B11 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1656273..1666557
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BaDB11_RS09035 (BaDB11_01826) | smpB | 1657083..1657556 (-) | 474 | WP_009329604.1 | SsrA-binding protein SmpB | - |
| BaDB11_RS09040 (BaDB11_01827) | rnr | 1657668..1659971 (-) | 2304 | WP_003185414.1 | ribonuclease R | - |
| BaDB11_RS09045 (BaDB11_01828) | - | 1659985..1660731 (-) | 747 | WP_003185416.1 | alpha/beta hydrolase | - |
| BaDB11_RS09050 (BaDB11_01829) | secG | 1660872..1661102 (-) | 231 | WP_003185418.1 | preprotein translocase subunit SecG | - |
| BaDB11_RS09055 (BaDB11_01830) | abrB | 1661273..1661557 (-) | 285 | WP_003185421.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BaDB11_RS09060 (BaDB11_01831) | - | 1661586..1661819 (-) | 234 | WP_085959538.1 | helix-turn-helix domain-containing protein | - |
| BaDB11_RS09065 (BaDB11_01832) | - | 1661972..1662373 (+) | 402 | WP_080618651.1 | helix-turn-helix domain-containing protein | - |
| BaDB11_RS09070 (BaDB11_01833) | - | 1662543..1662941 (+) | 399 | WP_009329610.1 | helix-turn-helix domain-containing protein | - |
| BaDB11_RS09075 (BaDB11_01834) | - | 1662989..1663666 (-) | 678 | WP_003185432.1 | ABC transporter permease | - |
| BaDB11_RS09080 (BaDB11_01835) | opuCC | 1663683..1664600 (-) | 918 | WP_009329611.1 | osmoprotectant ABC transporter substrate-binding lipoprotein OpuCC | - |
| BaDB11_RS09085 (BaDB11_01836) | - | 1664614..1665267 (-) | 654 | WP_009329612.1 | ABC transporter permease | - |
| BaDB11_RS09090 (BaDB11_01837) | - | 1665289..1666428 (-) | 1140 | WP_003185439.1 | betaine/proline/choline family ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10486.36 Da Isoelectric Point: 7.9620
>NTDB_id=150179 BaDB11_RS09055 WP_003185421.1 1661273..1661557(-) (abrB) [Bacillus licheniformis strain SCK B11]
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDITTKNKTYAGGKIVLSPRGAE
MLLEDMMAALSEKK
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDITTKNKTYAGGKIVLSPRGAE
MLLEDMMAALSEKK
Nucleotide
Download Length: 285 bp
>NTDB_id=150179 BaDB11_RS09055 WP_003185421.1 1661273..1661557(-) (abrB) [Bacillus licheniformis strain SCK B11]
GTGAAAAATACCGGGATTGTCCGGAGAATCGATGAGCTCGGCAGAGTCGTTCTCCCGGTCGAAATGCGCAGGGTGCTGAA
TATCAATGAAAAGGACCCGCTCGAAATATATACCGACGGCGAAAACATCATTTTGACAAAATACGCCGCAAACATGGCAT
GTTTGATGACCGGCGACATCACCACGAAAAATAAAACGTATGCGGGCGGCAAAATCGTACTCAGCCCGCGCGGAGCGGAA
ATGCTCCTGGAAGATATGATGGCGGCACTGTCAGAAAAGAAATAA
GTGAAAAATACCGGGATTGTCCGGAGAATCGATGAGCTCGGCAGAGTCGTTCTCCCGGTCGAAATGCGCAGGGTGCTGAA
TATCAATGAAAAGGACCCGCTCGAAATATATACCGACGGCGAAAACATCATTTTGACAAAATACGCCGCAAACATGGCAT
GTTTGATGACCGGCGACATCACCACGAAAAATAAAACGTATGCGGGCGGCAAAATCGTACTCAGCCCGCGCGGAGCGGAA
ATGCTCCTGGAAGATATGATGGCGGCACTGTCAGAAAAGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.044 |
96.809 |
0.543 |