Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   ACX61_RS17900 Genome accession   NZ_CP012006
Coordinates   3745782..3746936 (+) Length   384 a.a.
NCBI ID   WP_000755277.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain Ab04-mff     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3740782..3751936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACX61_RS17875 (ACX61_17875) - 3740934..3742148 (+) 1215 WP_001177954.1 oxygenase MpaB family protein -
  ACX61_RS17880 (ACX61_17880) - 3742218..3742424 (-) 207 WP_000182542.1 hypothetical protein -
  ACX61_RS17885 (ACX61_17885) - 3742478..3744592 (-) 2115 WP_001120685.1 TonB-dependent copper receptor -
  ACX61_RS17890 (ACX61_17890) - 3744664..3745092 (-) 429 WP_000231986.1 DUF2946 family protein -
  ACX61_RS17895 (ACX61_17895) def 3745129..3745659 (-) 531 WP_001196539.1 peptide deformylase -
  ACX61_RS17900 (ACX61_17900) tsaP 3745782..3746936 (+) 1155 WP_000755277.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACX61_RS17905 (ACX61_17905) dprA 3746957..3748087 (+) 1131 WP_049592564.1 DNA-processing protein DprA Machinery gene
  ACX61_RS17910 (ACX61_17910) - 3748138..3748707 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  ACX61_RS17915 (ACX61_17915) - 3749099..3750019 (-) 921 WP_000084546.1 DMT family transporter -
  ACX61_RS17920 (ACX61_17920) - 3750125..3750775 (-) 651 WP_086225940.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42355.34 Da        Isoelectric Point: 8.5816

>NTDB_id=150133 ACX61_RS17900 WP_000755277.1 3745782..3746936(+) (tsaP) [Acinetobacter baumannii strain Ab04-mff]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQLQVRVEALNNSVPVIPLEHIKQWLE
SSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMLEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=150133 ACX61_RS17900 WP_000755277.1 3745782..3746936(+) (tsaP) [Acinetobacter baumannii strain Ab04-mff]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCTTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCCCTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTTTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTCGGTATTATTCGCCGCTATACAGGTCAAACCACAAACC
TACAACTACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AGCAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGTTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGTGATCGTGTTATGCTTGA
AGAGCAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGCTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACTAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAAGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

98.698

100

0.987


Multiple sequence alignment