Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACX61_RS10300 | Genome accession | NZ_CP012006 |
| Coordinates | 2148617..2148997 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836909.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain Ab04-mff | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2143617..2153997
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACX61_RS10270 (ACX61_10270) | tadA | 2143736..2144239 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| ACX61_RS10275 (ACX61_10275) | - | 2144246..2145370 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACX61_RS10280 (ACX61_10280) | ung | 2145367..2146080 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ACX61_RS10285 (ACX61_10285) | - | 2146131..2146727 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| ACX61_RS10290 (ACX61_10290) | gspK | 2146957..2147916 (-) | 960 | WP_001218621.1 | type II secretion system minor pseudopilin GspK | - |
| ACX61_RS10295 (ACX61_10295) | xcpW | 2147916..2148617 (-) | 702 | WP_000594588.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACX61_RS10300 (ACX61_10300) | xcpV | 2148617..2148997 (-) | 381 | WP_000836909.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACX61_RS10305 (ACX61_10305) | - | 2148987..2149541 (-) | 555 | WP_000841372.1 | type II secretion system protein | - |
| ACX61_RS10310 (ACX61_10310) | - | 2149551..2150159 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACX61_RS10315 (ACX61_10315) | - | 2150197..2150970 (-) | 774 | WP_000497301.1 | TatD family hydrolase | - |
| ACX61_RS10320 (ACX61_10320) | - | 2150988..2151329 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACX61_RS10325 (ACX61_10325) | - | 2151341..2152321 (-) | 981 | WP_001075419.1 | DNA polymerase III subunit delta' | - |
| ACX61_RS10330 (ACX61_10330) | kdsB | 2152333..2153094 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13991.24 Da Isoelectric Point: 9.8004
>NTDB_id=150114 ACX61_RS10300 WP_000836909.1 2148617..2148997(-) (xcpV) [Acinetobacter baumannii strain Ab04-mff]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=150114 ACX61_RS10300 WP_000836909.1 2148617..2148997(-) (xcpV) [Acinetobacter baumannii strain Ab04-mff]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |