Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACX60_RS10280 | Genome accession | NZ_CP012004 |
| Coordinates | 2157898..2158278 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836915.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain ATCC 17978-mff | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2152898..2163278
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACX60_RS10250 (ACX60_10255) | tadA | 2153017..2153520 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| ACX60_RS10255 (ACX60_10260) | - | 2153527..2154651 (-) | 1125 | WP_000982062.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACX60_RS10260 (ACX60_10265) | ung | 2154648..2155361 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACX60_RS10265 (ACX60_10270) | - | 2155412..2156008 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| ACX60_RS10270 (ACX60_10275) | gspK | 2156238..2157197 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| ACX60_RS10275 (ACX60_10280) | xcpW | 2157197..2157898 (-) | 702 | WP_000594584.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACX60_RS10280 (ACX60_10285) | xcpV | 2157898..2158278 (-) | 381 | WP_000836915.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACX60_RS10285 (ACX60_10290) | - | 2158268..2158822 (-) | 555 | WP_000841375.1 | type II secretion system protein | - |
| ACX60_RS10290 (ACX60_10295) | - | 2158832..2159440 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACX60_RS10295 (ACX60_10300) | - | 2159478..2160251 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACX60_RS10300 (ACX60_10305) | - | 2160269..2160610 (-) | 342 | WP_001183025.1 | PilZ domain-containing protein | - |
| ACX60_RS10305 (ACX60_10310) | - | 2160622..2161602 (-) | 981 | WP_001075412.1 | DNA polymerase III subunit delta' | - |
| ACX60_RS10310 (ACX60_10315) | kdsB | 2161614..2162375 (-) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=150067 ACX60_RS10280 WP_000836915.1 2157898..2158278(-) (xcpV) [Acinetobacter baumannii strain ATCC 17978-mff]
MKSKGFTLLEVMVALAIFAVAAVALTKVATQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGEIWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVATQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGEIWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=150067 ACX60_RS10280 WP_000836915.1 2157898..2158278(-) (xcpV) [Acinetobacter baumannii strain ATCC 17978-mff]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAACGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAATTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAACGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAATTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
98.413 |
100 |
0.984 |