NTDB

Overview

Name	comQ	Type	Regulator
Locus tag	B34_RS09810	Genome accession	NZ_CP014793
Coordinates	1801933..1802802 (-)	Length	289 a.a.
NCBI ID	WP_011198252.1	Uniprot ID	Q8VQ63
Organism	Bacillus licheniformis strain SCDB 34
Function	modification of ComX; production of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1796933..1807802

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B34_RS09775 (B34_01978)	-	1797104..1797580 (+)	477	WP_003184840.1	Na+/H+ antiporter subunit E	-
B34_RS09780 (B34_01979)	-	1797580..1797864 (+)	285	WP_003184842.1	Na(+)/H(+) antiporter subunit F1	-
B34_RS09785 (B34_01980)	mnhG	1797848..1798222 (+)	375	WP_003184844.1	monovalent cation/H(+) antiporter subunit G	-
B34_RS09790 (B34_01981)	-	1798262..1798651 (-)	390	WP_009329508.1	hotdog fold thioesterase	-
B34_RS09795 (B34_01982)	comA	1798668..1799306 (-)	639	WP_003184849.1	response regulator transcription factor	Regulator
B34_RS09800 (B34_01983)	comP	1799393..1801714 (-)	2322	WP_026080865.1	ATP-binding protein	Regulator
B34_RS09805 (B34_01984)	comX	1801754..1801918 (-)	165	WP_011198251.1	competence pheromone ComX	-
B34_RS09810 (B34_01985)	comQ	1801933..1802802 (-)	870	WP_011198252.1	polyprenyl synthetase family protein	Regulator
B34_RS09815 (B34_01986)	degQ	1802991..1803131 (-)	141	WP_003184860.1	degradation enzyme regulation protein DegQ	Regulator
B34_RS09825 (B34_01988)	-	1803617..1803964 (+)	348	WP_009329512.1	hypothetical protein	-
B34_RS09830 (B34_01989)	-	1804007..1805227 (-)	1221	WP_003184864.1	EAL and HDOD domain-containing protein	-
B34_RS09835 (B34_01990)	-	1805406..1806815 (-)	1410	WP_228767691.1	nicotinate phosphoribosyltransferase	-
B34_RS09840 (B34_01991)	-	1806893..1807444 (-)	552	WP_003184868.1	cysteine hydrolase family protein	-

Sequence

Protein

Download Length: 289 a.a. Molecular weight: 32743.41 Da Isoelectric Point: 4.6799

                                >NTDB_id=149904 B34_RS09810 WP_011198252.1 1801933..1802802(-) (comQ) [Bacillus licheniformis strain SCDB 34]

MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM

KINRSVAMNAATALYTISIKVIGSVSKEPVFFEKLMEYTLQSMQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGA

MLATGKFDPTVEKYAYQLGIASQIENDYKALFYDSKSDIAKKKRTLAYLYLSRKFNQPSIDLLKTFETEDKIADKEIKCY

KEKLKAAGVTQYMYVMNQLAIQKFKKGIGELELGDMEKERLMSTLLNNN

Nucleotide

Download Length: 870 bp

                                >NTDB_id=149904 B34_RS09810 WP_011198252.1 1801933..1802802(-) (comQ) [Bacillus licheniformis strain SCDB 34]

ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA

GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG

CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG

AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA

AGAACCGGTGTTTTTCGAAAAGCTAATGGAATATACACTTCAATCGATGCAGGGACAGCATGACGATCTCAGCAACCGCC

CTGCCACTGAAGATGAGTGCCTTGACATGATCAAGCGTAAATCCGGGGCGCTGACAGCCTTGCCATGCGTGCTGGGAGCT

ATGCTTGCTACGGGCAAATTTGACCCGACGGTTGAAAAGTACGCCTACCAGCTGGGCATTGCTTCACAAATTGAAAATGA

TTATAAAGCACTTTTTTATGATTCAAAAAGCGATATCGCCAAGAAAAAGCGGACGCTTGCGTATTTATATTTGTCAAGAA

AATTTAACCAGCCGTCGATTGATTTGTTAAAAACATTTGAAACTGAGGATAAAATTGCCGATAAAGAAATAAAATGCTAT

AAAGAGAAATTGAAGGCAGCAGGCGTCACTCAGTATATGTATGTTATGAATCAGCTCGCTATTCAGAAATTTAAGAAGGG

AATCGGGGAGCTTGAGTTGGGGGATATGGAGAAAGAACGTTTGATGTCTACCCTGCTGAATAACAATTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(41-227)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	Q8VQ63

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comQ	Bacillus subtilis subsp. subtilis str. 168	45.361	100	0.457

Detailed information NTG0149904