Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   H218_RS17515 Genome accession   NZ_CP011976
Coordinates   3462158..3462754 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae DMC1097     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3457158..3467754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H218_RS17500 (H218_17540) helD 3457366..3459420 (-) 2055 WP_002898429.1 DNA helicase IV -
  H218_RS17505 (H218_17545) - 3459545..3459991 (+) 447 WP_002898425.1 YccF domain-containing protein -
  H218_RS17510 (H218_17550) yccS 3460009..3462144 (+) 2136 WP_002898422.1 YccS family putative transporter -
  H218_RS17515 (H218_17555) sxy/tfoX 3462158..3462754 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  H218_RS17520 (H218_17560) sulA 3463103..3463612 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  H218_RS17525 (H218_17565) ompA 3463965..3465035 (+) 1071 WP_002898408.1 porin OmpA -
  H218_RS17530 (H218_17570) matP 3465167..3465619 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  H218_RS17535 (H218_17575) - 3465805..3467562 (+) 1758 WP_002898401.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=149897 H218_RS17515 WP_004150836.1 3462158..3462754(-) (sxy/tfoX) [Klebsiella pneumoniae DMC1097]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=149897 H218_RS17515 WP_004150836.1 3462158..3462754(-) (sxy/tfoX) [Klebsiella pneumoniae DMC1097]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment