Detailed information    

insolico Bioinformatically predicted

Overview

Name   recJ   Type   Machinery gene
Locus tag   BEH_RS20395 Genome accession   NZ_CP011974
Coordinates   4138362..4140719 (-) Length   785 a.a.
NCBI ID   WP_046217876.1    Uniprot ID   A0A1X7CV37
Organism   Priestia filamentosa strain Hbe603     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4133362..4145719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEH_RS27525 - 4133813..4133980 (-) 168 WP_019391367.1 hypothetical protein -
  BEH_RS20375 (BEH_20415) - 4134096..4134962 (+) 867 WP_082864759.1 N-acetylmuramoyl-L-alanine amidase -
  BEH_RS20380 (BEH_20420) dtd 4134984..4135430 (-) 447 WP_019391365.1 D-aminoacyl-tRNA deacylase -
  BEH_RS20385 (BEH_20425) - 4135446..4137653 (-) 2208 WP_046217875.1 RelA/SpoT family protein -
  BEH_RS20390 (BEH_20430) - 4137841..4138362 (-) 522 WP_019391363.1 adenine phosphoribosyltransferase -
  BEH_RS20395 (BEH_20435) recJ 4138362..4140719 (-) 2358 WP_046217876.1 single-stranded-DNA-specific exonuclease RecJ Machinery gene
  BEH_RS20400 (BEH_20440) secDF 4140831..4143068 (-) 2238 WP_046217877.1 protein translocase subunit SecDF -
  BEH_RS20405 (BEH_20445) - 4143216..4143506 (-) 291 WP_019391360.1 post-transcriptional regulator -
  BEH_RS20410 (BEH_20450) spoVB 4143640..4145199 (+) 1560 WP_019391359.1 stage V sporulation protein B -

Sequence

Protein


Download         Length: 785 a.a.        Molecular weight: 88301.86 Da        Isoelectric Point: 4.7899

>NTDB_id=149848 BEH_RS20395 WP_046217876.1 4138362..4140719(-) (recJ) [Priestia filamentosa strain Hbe603]
MLHSKKRWRVQETDAAKAEELASQLSVSPLVASLLMNRDITTVDEARHFLYLTDENMHDPYLLKDMDIVVERIQRAIRDE
EKIMIYGDYDADGVSSTSVMLTALRTLGAHVDFYIPNRFTEGYGPNEGAFRHIGEQGYTLVITVDTGISGVNEADVAEEC
GFDLIITDHHEPGPELPKAFAIIHPKLSERYPFKELAGVGVALKIGQALLGEISPALVELAAIGTVADLVPLQDENRYIV
QKGLHYLRHTNRPGMKALLNVCGVNQKEITEETIGFAIGPRINAIGRLEQADPAVHLLMTTDQEEAESLAEEIDQCNQER
RNIVKEITDQAIEMVKTQFPPEENAVLVLAKEGWNPGVIGIVASRLVNEFYRPTIVLGIDEEGKIAKGSARSIEGFDLFA
NLSKCRDILPHFGGHPMAAGMTLALENVSLLREKMNKFGHELLSEEDFIPAVNIDVKASLDEITTDSIEELNKLAPFGVN
NPKPKVLIKDVPISSMRKIGADKTHLKVVVGDADCSLDGVGFGLGYLHDRISPLAHVSLVGELTINEWNNRRKPQIMLED
ASVEEWQLFDVRGVRKVSTFLADYITSDMLLVAFNEKTVQKEEFASYIDQVRLINSEKSTNELQGYEGDIVLLDVPPSLE
TLKTLMSGCKPARVYMLFLTEEDHFLNTVPTRDHFKWYYGFLLKKGPFDLKRYKQDLALHKGWTKETIDFMSQVFFELEF
ATIENGVISLVQHTPKRDLIESVTYKTKQEQLQVEKELIYRSYGELKELFEHFRKSSVINEEEIS

Nucleotide


Download         Length: 2358 bp        

>NTDB_id=149848 BEH_RS20395 WP_046217876.1 4138362..4140719(-) (recJ) [Priestia filamentosa strain Hbe603]
ATGTTACATTCAAAAAAGCGATGGAGAGTACAGGAAACAGACGCTGCAAAGGCAGAGGAGTTAGCAAGTCAGCTCTCTGT
TTCACCACTTGTTGCCTCTCTTTTGATGAATAGAGATATTACAACAGTAGATGAAGCAAGACACTTTTTATATTTAACAG
ATGAAAATATGCATGATCCATATCTTTTAAAAGATATGGACATTGTTGTTGAACGCATTCAGCGCGCTATTCGGGATGAA
GAGAAGATTATGATTTATGGAGATTACGATGCGGACGGAGTAAGCAGTACCTCTGTTATGTTAACAGCGCTTAGAACGCT
TGGAGCTCACGTTGATTTTTATATTCCAAATCGTTTTACAGAAGGATATGGTCCAAATGAAGGAGCTTTCCGTCATATTG
GTGAGCAAGGATATACGCTCGTTATCACGGTTGATACAGGAATCTCAGGTGTAAACGAAGCTGATGTTGCCGAAGAGTGC
GGCTTTGATCTTATTATTACAGATCATCATGAACCAGGCCCAGAGCTTCCAAAAGCTTTTGCTATCATTCACCCAAAACT
TTCTGAACGGTATCCTTTTAAAGAGCTAGCAGGAGTAGGCGTTGCCTTGAAAATTGGTCAAGCTCTTTTAGGTGAAATAA
GCCCTGCCCTTGTAGAACTTGCAGCAATTGGAACTGTAGCAGATTTAGTTCCTTTGCAAGATGAAAATCGCTACATCGTT
CAAAAGGGACTTCACTATCTAAGGCATACAAACCGCCCCGGAATGAAAGCTCTTTTGAACGTTTGTGGGGTGAATCAGAA
GGAAATTACAGAAGAAACGATTGGATTTGCCATTGGTCCTCGTATTAATGCTATTGGACGTCTAGAGCAAGCAGATCCAG
CTGTGCATCTTTTAATGACGACAGATCAAGAAGAAGCAGAAAGCCTCGCAGAAGAAATTGATCAATGCAATCAAGAACGG
AGAAATATTGTAAAAGAGATTACAGATCAAGCGATTGAAATGGTGAAAACACAGTTTCCTCCAGAAGAGAATGCAGTTCT
TGTACTTGCAAAAGAAGGATGGAACCCTGGCGTTATTGGTATTGTTGCTTCAAGGCTTGTAAATGAGTTTTATCGCCCAA
CAATTGTGCTTGGTATAGATGAAGAGGGGAAAATTGCTAAAGGCTCTGCACGAAGCATCGAAGGATTCGATCTTTTTGCT
AACTTATCAAAGTGCCGTGATATTTTACCGCATTTTGGAGGACATCCGATGGCAGCTGGAATGACCTTAGCGCTAGAGAA
TGTCTCCCTTTTACGCGAAAAAATGAACAAATTCGGTCACGAGCTTCTCAGTGAAGAAGACTTTATTCCAGCAGTAAATA
TTGATGTGAAGGCTTCCCTTGACGAAATTACAACAGATTCTATTGAGGAATTAAATAAGCTTGCCCCCTTTGGTGTTAAC
AACCCCAAACCAAAAGTTCTTATTAAGGATGTTCCGATTTCTTCAATGCGCAAAATTGGAGCGGATAAAACTCATCTGAA
AGTTGTTGTAGGAGATGCAGATTGCTCGCTTGACGGAGTTGGATTTGGACTTGGCTATCTTCATGACAGAATATCGCCGC
TTGCTCATGTTTCTCTAGTAGGAGAGCTTACCATCAACGAATGGAACAATCGTCGCAAACCACAAATCATGCTTGAAGAT
GCTTCAGTGGAGGAATGGCAGCTTTTTGACGTAAGAGGAGTTCGGAAAGTGTCAACGTTTTTAGCTGACTATATTACAAG
TGATATGCTTCTTGTTGCATTTAACGAAAAGACGGTTCAAAAAGAAGAGTTTGCTTCATATATTGATCAAGTGAGACTTA
TAAACTCAGAAAAGTCTACCAACGAGCTACAAGGTTATGAAGGAGATATTGTTTTATTGGATGTTCCTCCTTCATTAGAG
ACTTTAAAAACATTAATGAGCGGATGTAAACCAGCTCGAGTGTATATGCTATTTTTAACAGAGGAAGATCATTTCTTAAA
TACAGTCCCAACCCGAGACCATTTTAAATGGTATTATGGCTTCCTTTTAAAAAAAGGACCGTTTGATCTTAAACGATATA
AACAAGATCTTGCCCTCCATAAAGGGTGGACAAAGGAAACGATTGACTTTATGTCACAGGTGTTTTTTGAGCTGGAATTT
GCTACAATAGAAAATGGTGTGATTTCTTTAGTGCAACATACACCAAAACGTGATTTAATAGAGTCTGTCACTTATAAGAC
AAAACAAGAACAGCTACAAGTGGAAAAAGAGTTAATTTACCGTTCCTACGGTGAATTGAAGGAGCTTTTTGAGCATTTTA
GAAAAAGCTCTGTGATCAATGAGGAGGAAATAAGCTAA

Domains

Predicted by InterproScan.

Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C)

(567-770)

DHH family (DHH)

(82-225)

DHHA1 domain (DHHA1)

(314-437)

RecJ OB domain (RecJ_OB)

(454-560)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X7CV37

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recJ Bacillus subtilis subsp. subtilis str. 168

54.897

98.854

0.543

Multiple sequence alignment