Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | B34_RS00945 | Genome accession | NZ_CP014793 |
| Coordinates | 186851..187213 (+) | Length | 120 a.a. |
| NCBI ID | WP_003181796.1 | Uniprot ID | A0A6I1MJA4 |
| Organism | Bacillus licheniformis strain SCDB 34 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 181851..192213
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B34_RS00915 (B34_00187) | flgD | 182695..183162 (+) | 468 | WP_003181782.1 | flagellar hook assembly protein FlgD | - |
| B34_RS00920 (B34_00188) | flgG | 183190..183981 (+) | 792 | WP_003181784.1 | flagellar basal body rod protein FlgG | - |
| B34_RS00925 | - | 184024..184239 (+) | 216 | WP_003181786.1 | flagellar FlbD family protein | - |
| B34_RS00930 (B34_00189) | fliL | 184236..184667 (+) | 432 | WP_009328514.1 | flagellar basal body-associated protein FliL | - |
| B34_RS00935 (B34_00190) | fliM | 184703..185701 (+) | 999 | WP_003181789.1 | flagellar motor switch protein FliM | - |
| B34_RS00940 (B34_00191) | fliY | 185691..186824 (+) | 1134 | WP_003181794.1 | flagellar motor switch phosphatase FliY | - |
| B34_RS00945 (B34_00192) | pilH | 186851..187213 (+) | 363 | WP_003181796.1 | response regulator | Machinery gene |
| B34_RS00950 (B34_00193) | fliZ | 187226..187900 (+) | 675 | WP_080623900.1 | flagella biosynthesis regulatory protein FliZ | - |
| B34_RS00955 (B34_00194) | fliP | 187893..188558 (+) | 666 | WP_009328512.1 | flagellar type III secretion system pore protein FliP | - |
| B34_RS00960 (B34_00195) | fliQ | 188574..188843 (+) | 270 | WP_003181801.1 | flagellar biosynthesis protein FliQ | - |
| B34_RS00965 (B34_00196) | fliR | 188851..189627 (+) | 777 | WP_003181804.1 | flagellar biosynthetic protein FliR | - |
| B34_RS00970 (B34_00197) | flhB | 189627..190706 (+) | 1080 | WP_003181806.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13280.60 Da Isoelectric Point: 4.5762
>NTDB_id=149847 B34_RS00945 WP_003181796.1 186851..187213(+) (pilH) [Bacillus licheniformis strain SCDB 34]
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=149847 B34_RS00945 WP_003181796.1 186851..187213(+) (pilH) [Bacillus licheniformis strain SCDB 34]
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.136 |
98.333 |
0.375 |