Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   BEH_RS19470 Genome accession   NZ_CP011974
Coordinates   3964484..3966193 (-) Length   569 a.a.
NCBI ID   WP_046217847.1    Uniprot ID   A0A1X7D0G2
Organism   Priestia filamentosa strain Hbe603     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3959484..3971193
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEH_RS19440 (BEH_19470) - 3959583..3960227 (-) 645 WP_019391555.1 nitroreductase family protein -
  BEH_RS19445 (BEH_19475) - 3960245..3961087 (-) 843 WP_019391554.1 VOC family protein -
  BEH_RS19450 (BEH_19480) - 3961090..3961476 (-) 387 WP_019391553.1 DoxX family protein -
  BEH_RS19455 (BEH_19485) - 3961626..3961943 (+) 318 WP_019391552.1 winged helix-turn-helix transcriptional regulator -
  BEH_RS19460 (BEH_19490) spo0A 3962006..3962797 (-) 792 WP_040056769.1 sporulation transcription factor Spo0A -
  BEH_RS19465 (BEH_19495) spoIVB 3963043..3964320 (-) 1278 WP_019391550.1 SpoIVB peptidase -
  BEH_RS19470 (BEH_19500) recN 3964484..3966193 (-) 1710 WP_046217847.1 DNA repair protein RecN Machinery gene
  BEH_RS19475 (BEH_19505) ahrC 3966208..3966657 (-) 450 WP_019391548.1 transcriptional regulator AhrC/ArgR -
  BEH_RS19480 (BEH_19510) - 3966856..3967680 (-) 825 WP_019391547.1 TlyA family RNA methyltransferase -
  BEH_RS19485 (BEH_19515) dxs 3967677..3969581 (-) 1905 WP_019391546.1 1-deoxy-D-xylulose-5-phosphate synthase -
  BEH_RS19490 (BEH_19520) - 3969785..3970663 (-) 879 WP_094041186.1 polyprenyl synthetase family protein -
  BEH_RS19495 (BEH_19525) - 3970660..3970899 (-) 240 WP_040056770.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63853.55 Da        Isoelectric Point: 5.2009

>NTDB_id=149842 BEH_RS19470 WP_046217847.1 3964484..3966193(-) (recN) [Priestia filamentosa strain Hbe603]
MLAELSIKNFAIIESLSLSFEKGLTVLTGETGAGKSIIIDAIHLLVGGRGSAEFVRHGTDRAEIEGLFLIEKSHPCFEKA
ESLGIEVEDEMVVLRRSITASGKSICRINGKLVTLAILREVGGTLVDIHGQHEHQDLMNGDRHLTLLDQYGGSTIEKALG
VYGSLYDEYISLKKQMEKLTENEQQRAHRLDLIQFQLNEIKTAELVPKEDENLFEEKIKISNYEKIYSSLRDAYYALHGE
QRGLDLVSVAMNNTGEIADLENDYKEISETVSNCFYQLEDVSYSIRQQLDALEFDPNRLDIIEARLNEINHLKRKYGQSV
EEILEYADAIEEEIDTIQNRDTHISKIEKQLESVVSELFKEAQNVSHTRKKLAEELTEKIHHELQALYMAKTVFKIQFAK
RGEEAPLSEKNVKFTKSGIDHVEFYISTNPGEPLKPLSKVASGGELSRIMLALKSIFSHHQGVTSIIFDEVDTGVSGRVA
QAIGEKIYQISTGSQVFCISHLPQVAAMADTHLFIAKKSVNDRTQTSVTTLSSNEKIIEIGRMIAGVEVTDLTKEHAKEL
LELAHQLKK

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=149842 BEH_RS19470 WP_046217847.1 3964484..3966193(-) (recN) [Priestia filamentosa strain Hbe603]
GTGTTAGCCGAACTATCGATTAAAAACTTTGCAATTATCGAAAGCCTATCTCTTTCATTTGAAAAAGGATTAACTGTTTT
AACAGGGGAGACAGGGGCTGGAAAGTCTATTATTATTGATGCGATTCATTTACTTGTTGGAGGACGAGGCTCTGCTGAAT
TTGTTCGACACGGTACGGATCGAGCAGAAATAGAAGGGCTGTTTTTAATTGAAAAAAGCCATCCCTGCTTTGAAAAAGCA
GAGTCGCTTGGAATTGAAGTGGAGGATGAGATGGTTGTGCTAAGGCGCTCGATTACAGCGAGCGGAAAAAGCATTTGTCG
CATTAATGGAAAGCTTGTGACACTTGCAATTTTACGTGAAGTCGGTGGAACGCTTGTTGATATTCACGGGCAGCATGAAC
ATCAAGACCTTATGAATGGTGATCGACACTTAACATTGCTTGATCAATATGGTGGTTCGACTATTGAAAAAGCGCTAGGG
GTATACGGTTCGCTTTATGATGAATACATAAGTCTGAAAAAACAAATGGAAAAGCTAACGGAAAATGAGCAGCAAAGGGC
CCACAGGCTAGATTTAATTCAATTTCAGCTCAATGAAATCAAAACAGCTGAACTTGTACCAAAAGAAGATGAGAATCTTT
TTGAAGAGAAAATTAAAATTTCGAACTATGAAAAGATTTATAGCTCGCTCAGAGATGCTTATTATGCTTTGCACGGGGAA
CAAAGAGGGCTTGATTTAGTATCTGTTGCAATGAACAACACAGGTGAGATTGCTGACTTAGAAAATGACTATAAAGAAAT
TTCAGAAACAGTGTCAAACTGTTTTTATCAACTTGAAGACGTCTCATACAGCATTCGCCAACAGCTTGATGCTTTAGAAT
TTGATCCAAATCGGCTTGATATTATTGAAGCTAGATTAAATGAGATCAATCACTTAAAGAGAAAGTATGGACAATCGGTG
GAAGAGATTTTAGAGTATGCTGATGCTATTGAAGAAGAAATTGATACGATTCAAAATAGAGATACACATATTTCTAAAAT
TGAAAAACAGCTTGAGTCAGTGGTAAGTGAACTTTTTAAAGAAGCGCAAAATGTTTCTCATACTCGAAAAAAGCTGGCTG
AAGAGCTAACAGAAAAGATTCATCATGAGCTTCAAGCTCTTTATATGGCTAAAACCGTATTTAAAATTCAGTTTGCTAAA
CGTGGAGAAGAAGCGCCCCTTAGTGAAAAAAATGTAAAATTTACGAAAAGCGGAATTGATCATGTGGAGTTTTACATCTC
AACAAACCCTGGTGAACCGTTGAAGCCTTTATCAAAAGTAGCGTCAGGAGGAGAGCTTTCTAGAATTATGCTCGCGCTTA
AAAGTATTTTCTCACATCATCAAGGTGTAACATCTATTATATTTGATGAAGTAGACACAGGAGTAAGTGGGCGAGTTGCT
CAAGCTATTGGAGAGAAGATTTACCAAATCTCAACAGGTTCACAAGTTTTCTGTATTTCCCATCTGCCACAGGTTGCAGC
AATGGCTGATACGCACTTATTTATTGCTAAAAAATCTGTGAACGATAGAACTCAAACAAGCGTTACAACGCTTAGTTCTA
ATGAAAAAATTATTGAAATTGGTCGTATGATTGCAGGAGTTGAAGTGACAGATTTAACAAAAGAACATGCAAAAGAGCTG
CTTGAGCTTGCGCATCAGCTGAAAAAGTAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X7D0G2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

62.478

100

0.629

Multiple sequence alignment