Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   CKU_RS10245 Genome accession   NZ_CP014791
Coordinates   2061234..2061704 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain MCRF184     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2056234..2066704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CKU_RS10225 (CKU_1891) coaW 2056544..2057347 (+) 804 WP_061869742.1 type II pantothenate kinase -
  CKU_RS10230 (CKU_1892) - 2057477..2058148 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  CKU_RS10235 (CKU_1893) ldmS 2058546..2059739 (-) 1194 WP_000186239.1 L-aspartate--L-methionine ligase LdmS -
  CKU_RS10240 (CKU_1894) - 2059739..2060923 (-) 1185 WP_001291503.1 M20 family metallopeptidase -
  CKU_RS10245 (CKU_1895) luxS 2061234..2061704 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  CKU_RS10250 (CKU_1896) - 2061856..2062206 (-) 351 WP_001024033.1 membrane protein -
  CKU_RS10255 (CKU_1897) - 2062220..2063521 (-) 1302 WP_001242295.1 pyrimidine-nucleoside phosphorylase -
  CKU_RS10260 (CKU_1898) deoC 2063805..2064467 (-) 663 WP_001083321.1 deoxyribose-phosphate aldolase -
  CKU_RS10265 (CKU_1899) deoD 2064782..2065492 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  CKU_RS10270 (CKU_1900) - 2065613..2066056 (-) 444 WP_000070865.1 Dps family protein -
  CKU_RS10275 (CKU_1901) - 2066256..2066669 (-) 414 WP_001123306.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=149830 CKU_RS10245 WP_000164421.1 2061234..2061704(+) (luxS) [Staphylococcus aureus strain MCRF184]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=149830 CKU_RS10245 WP_000164421.1 2061234..2061704(+) (luxS) [Staphylococcus aureus strain MCRF184]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCTG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTACTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404