Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   A1R12_RS19300 Genome accession   NZ_CP014783
Coordinates   3987244..3988095 (-) Length   283 a.a.
NCBI ID   WP_004392966.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain B15     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3982244..3993095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A1R12_RS19275 (A1R12_19275) - 3982411..3984414 (-) 2004 WP_015418650.1 molybdopterin-dependent oxidoreductase -
  A1R12_RS19280 (A1R12_19280) - 3984461..3984667 (-) 207 WP_004392973.1 DUF951 domain-containing protein -
  A1R12_RS19285 (A1R12_19285) - 3984753..3985778 (-) 1026 WP_108702422.1 hypothetical protein -
  A1R12_RS19290 (A1R12_19290) - 3985922..3986425 (+) 504 WP_031379334.1 GNAT family N-acetyltransferase -
  A1R12_RS19295 (A1R12_19295) yyaC 3986600..3987214 (+) 615 WP_004392969.1 spore protease YyaC -
  A1R12_RS19300 (A1R12_19300) spo0J 3987244..3988095 (-) 852 WP_004392966.1 ParB/RepB/Spo0J family partition protein Regulator
  A1R12_RS19305 (A1R12_19305) soj 3988088..3988849 (-) 762 WP_061890937.1 sporulation initiation inhibitor protein Soj -
  A1R12_RS19310 (A1R12_19310) noc 3989148..3989999 (-) 852 WP_007409900.1 nucleoid occlusion protein -
  A1R12_RS19315 (A1R12_19315) rsmG 3990121..3990840 (-) 720 WP_059367409.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  A1R12_RS19320 (A1R12_19320) mnmG 3990854..3992740 (-) 1887 WP_007615086.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -

Sequence

Protein


Download         Length: 283 a.a.        Molecular weight: 32351.29 Da        Isoelectric Point: 8.3471

>NTDB_id=149749 A1R12_RS19300 WP_004392966.1 3987244..3988095(-) (spo0J) [Bacillus amyloliquefaciens strain B15]
MAKGGLGKGINALFNQVDLSEETVEEIKISDLRPNPYQPRKQFDDESLAELKESIIQHGILQPIIVRKSLKGYDIVAGER
RYRAAKLAGKETVPAIVRDLSESLMREIALLENLQREDLSPLEEALAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLL
TLPESIQNLIAEGTLSMGHGRTLLGLKNKNKLEPLVKKVVEEQLNVRQLEQLIQQLNNNVPRETKKKEPVQDVVLKERES
YLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLERILELLSEREA

Nucleotide


Download         Length: 852 bp        

>NTDB_id=149749 A1R12_RS19300 WP_004392966.1 3987244..3988095(-) (spo0J) [Bacillus amyloliquefaciens strain B15]
ATGGCTAAAGGCGGGCTCGGAAAAGGGATTAACGCGTTGTTTAATCAGGTTGATTTGTCTGAAGAGACAGTGGAAGAGAT
TAAAATCAGTGATTTACGTCCCAATCCTTATCAGCCAAGAAAACAATTTGACGATGAGTCATTAGCTGAACTGAAGGAAT
CCATCATTCAGCATGGCATTCTTCAGCCCATTATCGTGAGAAAATCATTGAAGGGCTATGATATTGTAGCCGGCGAACGC
CGTTACCGCGCCGCAAAACTTGCCGGTAAAGAGACAGTGCCGGCTATCGTGCGGGATTTATCTGAATCGCTGATGCGGGA
AATCGCTCTTTTGGAAAACCTTCAGCGTGAAGACTTATCACCGCTTGAAGAAGCTCTGGCATATGACTCACTGCTGAAGC
ATTTGGATTTAACCCAGGAACAGCTCGCTAAACGGCTCGGAAAAAGCAGGCCTCATATTGCCAACCATTTAAGACTGCTG
ACACTGCCGGAAAGCATCCAGAACCTCATTGCAGAAGGTACGTTATCCATGGGACACGGCAGAACCTTGCTTGGTTTGAA
AAATAAAAACAAGCTTGAACCGCTTGTGAAGAAAGTGGTTGAAGAACAGCTGAACGTCCGTCAGCTTGAGCAGCTGATTC
AGCAGTTAAACAACAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTTCAAGATGTTGTGTTAAAAGAGCGGGAATCG
TATTTGCAAAATTACTTCGGAACAACAGTAAATATTAAGAGACAAAAGAAAAAAGGGAAGATTGAGATTGAGTTTTTCTC
AAATGAAGATCTTGAACGTATCCTAGAACTATTGTCTGAAAGAGAAGCGTAA

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(25-113)

HTH domain found in ParB protein (HTH_ParB)

(164-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.538

91.873

0.382