Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   A1R12_RS13900 Genome accession   NZ_CP014783
Coordinates   2922320..2923015 (-) Length   231 a.a.
NCBI ID   WP_014418686.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain B15     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2917320..2928015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A1R12_RS13880 (A1R12_13880) - 2917710..2918420 (-) 711 WP_033574235.1 TIGR02206 family membrane protein -
  A1R12_RS13885 (A1R12_13885) - 2918528..2920468 (-) 1941 WP_061890777.1 FtsX-like permease family protein -
  A1R12_RS13890 (A1R12_13890) - 2920465..2921220 (-) 756 WP_033574237.1 ABC transporter ATP-binding protein -
  A1R12_RS13895 (A1R12_13895) - 2921323..2922327 (-) 1005 WP_061890778.1 sensor histidine kinase -
  A1R12_RS13900 (A1R12_13900) braR 2922320..2923015 (-) 696 WP_014418686.1 response regulator transcription factor Regulator
  A1R12_RS13905 (A1R12_13905) - 2923079..2924389 (-) 1311 WP_061890779.1 ABC transporter permease -
  A1R12_RS13910 (A1R12_13910) - 2924379..2925074 (-) 696 WP_007408816.1 ABC transporter ATP-binding protein -
  A1R12_RS13915 (A1R12_13915) - 2925090..2926070 (-) 981 WP_061860809.1 hypothetical protein -
  A1R12_RS13920 (A1R12_13920) - 2926107..2927093 (-) 987 WP_039254158.1 ABC transporter permease -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26839.08 Da        Isoelectric Point: 7.1196

>NTDB_id=149715 A1R12_RS13900 WP_014418686.1 2922320..2923015(-) (braR) [Bacillus amyloliquefaciens strain B15]
MFHILLIEDDNTLFHEMKERLTGWSFAVHGIKDFSRVIREFSEIKPDLVIIDVQLPKFDGFHWCRMIRSQSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAVFRRVHQYGTEPALMKRWCGAVIDTETNTVSRKNGSVELTKNEMLI
LKLLAEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDQLGIGKMIETKVGQGYIAKEEDGLYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=149715 A1R12_RS13900 WP_014418686.1 2922320..2923015(-) (braR) [Bacillus amyloliquefaciens strain B15]
ATGTTTCACATTTTGTTAATAGAAGATGATAACACTTTATTTCACGAGATGAAAGAGAGATTAACGGGCTGGTCATTTGC
GGTGCACGGAATAAAAGATTTCAGCCGGGTCATCCGGGAGTTTTCCGAAATTAAGCCTGATTTGGTGATCATTGATGTAC
AGCTGCCGAAATTTGACGGCTTTCATTGGTGCAGAATGATACGCTCCCAATCAAACGTGCCGATTCTCTTTTTGTCCTCG
CGCGATCATCCCGCGGATATGGTCATGTCGATGCAGCTCGGGGCAGATGATTTTATTCAGAAGCCTTTTCACTTTGATGT
GTTAATCGCGAAAATACAGGCGGTGTTCCGCCGTGTGCATCAATACGGCACAGAACCGGCGCTGATGAAAAGATGGTGCG
GGGCGGTCATTGACACAGAAACCAACACGGTCAGCCGTAAAAACGGTTCGGTCGAGCTGACCAAAAACGAAATGCTGATC
TTAAAACTGCTGGCTGAGCAGAAAAATAAAATCGTCAGCAGGGAAGAACTCATCAGAAGCCTATGGAATGATGAGCGTTT
CGTCAGTGATAATACGCTGACGGTGAATGTCAACCGGCTGCGGAAAAAACTCGATCAATTAGGCATCGGGAAAATGATTG
AAACCAAGGTGGGGCAGGGATACATCGCAAAGGAAGAAGACGGTCTTTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.639

94.805

0.385