Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   AB684_RS21255 Genome accession   NZ_CP014781
Coordinates   4160338..4161045 (-) Length   235 a.a.
NCBI ID   WP_003177869.1    Uniprot ID   A0AA90EY57
Organism   Bacillus licheniformis strain HRBL-15TDI7     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 4155338..4166045
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB684_RS21235 (AB684_21235) - 4155381..4156469 (-) 1089 WP_003177863.1 acyltransferase family protein -
  AB684_RS21240 (AB684_21240) - 4156617..4158503 (-) 1887 WP_017474424.1 FtsX-like permease family protein -
  AB684_RS21245 (AB684_21245) - 4158478..4159242 (-) 765 WP_003177865.1 ABC transporter ATP-binding protein -
  AB684_RS21250 (AB684_21250) - 4159334..4160341 (-) 1008 WP_003177867.1 sensor histidine kinase -
  AB684_RS21255 (AB684_21255) braR 4160338..4161045 (-) 708 WP_003177869.1 response regulator transcription factor Regulator
  AB684_RS21260 (AB684_21260) - 4161228..4161599 (+) 372 WP_003177872.1 YxeA family protein -
  AB684_RS21265 (AB684_21265) - 4161628..4163313 (-) 1686 WP_003177874.1 methyl-accepting chemotaxis protein -
  AB684_RS21270 (AB684_21270) - 4163468..4164892 (-) 1425 WP_003177876.1 alanine/glycine:cation symporter family protein -

Sequence


Protein


Download         Length: 235 a.a.        Molecular weight: 27044.93 Da        Isoelectric Point: 4.9777

>NTDB_id=149596 AB684_RS21255 WP_003177869.1 4160338..4161045(-) (braR) [Bacillus licheniformis strain HRBL-15TDI7]
MQKVMIVEDDPKIADLLKSHIVKYGYNVHVVKDFDRVMDEFRSTAPDLVLLDINLPSFDGYYWCRQIRQESICPVLFISA
RTGEMDQVMALENGGDDFITKPFHAEIVMAKIRSQLRRAYGEYAAKAEERLLEKEGLRLYPERLELTFAGQTAALTKKEA
DIIESLMERHPRISGREDLLAKLWDDQAYVDENTLNVNITRVRKKFQELGIEDAVETVRGAGYRLNVSWVKAGEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=149596 AB684_RS21255 WP_003177869.1 4160338..4161045(-) (braR) [Bacillus licheniformis strain HRBL-15TDI7]
ATGCAAAAAGTGATGATTGTAGAAGACGACCCGAAAATTGCAGATTTGTTAAAATCGCATATTGTCAAATACGGATACAA
CGTTCATGTAGTGAAAGACTTTGACCGTGTCATGGATGAGTTCAGAAGCACGGCGCCTGATCTTGTTCTGCTTGATATTA
ACCTGCCGAGCTTTGACGGCTACTACTGGTGCCGGCAAATCCGCCAGGAATCGATTTGCCCCGTCTTGTTTATTTCTGCG
CGGACAGGTGAAATGGATCAGGTGATGGCATTGGAAAACGGCGGAGATGACTTTATCACCAAGCCGTTTCACGCCGAGAT
CGTCATGGCAAAAATACGCAGCCAGCTTCGCAGGGCTTACGGCGAATACGCGGCGAAGGCGGAGGAACGGCTGCTGGAAA
AAGAAGGGCTGCGGCTGTATCCGGAAAGACTTGAACTGACATTTGCCGGTCAAACGGCTGCTTTGACGAAAAAAGAAGCG
GATATTATTGAAAGCTTAATGGAACGCCATCCGAGAATTTCAGGCCGCGAAGATTTGCTGGCCAAGCTGTGGGATGATCA
GGCATATGTGGATGAAAACACGCTTAATGTCAACATTACGCGCGTCAGAAAAAAGTTTCAGGAGCTCGGTATTGAAGATG
CAGTGGAAACAGTGCGGGGCGCGGGCTATCGCTTGAATGTATCCTGGGTGAAGGCGGGAGAGGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA90EY57

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.91

94.894

0.379


Multiple sequence alignment