Detailed information NTG0149481

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB684_RS05380
• Genome accession: NZ_CP014781
• Coordinates: 1072178..1073296 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain HRBL-15TDI7
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1067178..1078296

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB684_RS05355 (AB684_05355)	-	1067378..1068883 (+)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-
AB684_RS05360 (AB684_05360)	-	1068965..1070176 (-)	1212	WP_003180218.1	cation:proton antiporter	-
AB684_RS05365 (AB684_05365)	-	1070183..1070680 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
AB684_RS05370 (AB684_05370)	-	1070745..1071074 (-)	330	WP_016886161.1	hypothetical protein	-
AB684_RS05375 (AB684_05375)	-	1071275..1072051 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
AB684_RS05380 (AB684_05380)	rapC	1072178..1073296 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
AB684_RS22410	-	1073286..1073423 (+)	138	WP_016886158.1	hypothetical protein	-
AB684_RS05385 (AB684_05385)	-	1073428..1073706 (+)	279	WP_003180226.1	hypothetical protein	-
AB684_RS05390 (AB684_05390)	-	1073781..1073966 (-)	186	WP_003180228.1	YhzD family protein	-
AB684_RS05395 (AB684_05395)	-	1074084..1074980 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
AB684_RS05400 (AB684_05400)	-	1074973..1076241 (+)	1269	WP_003180232.1	ABC transporter permease	-
AB684_RS05405 (AB684_05405)	-	1076361..1077587 (+)	1227	WP_009328954.1	metallophosphoesterase family protein	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=149481 AB684_RS05380 WP_009328956.1 1072178..1073296(+) (rapC) [Bacillus licheniformis strain HRBL-15TDI7]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=149481 AB684_RS05380 WP_009328956.1 1072178..1073296(+) (rapC) [Bacillus licheniformis strain HRBL-15TDI7]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374