Detailed information NTG0149295

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: A0W68_RS05965
• Genome accession: NZ_CP014744
• Coordinates: 1121295..1122254 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni strain OD267
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1116295..1127254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A0W68_RS05940 (A0W68_05940)	neuC	1116860..1117975 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
A0W68_RS10375 (A0W68_05945)	-	1117972..1118838 (+)	867	Protein_1144	beta-1,4-N-acetylgalactosaminyltransferase	-
A0W68_RS10380 (A0W68_05950)	-	1118920..1119582 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
A0W68_RS05955 (A0W68_05955)	-	1119577..1120428 (-)	852	WP_043020460.1	glycosyltransferase	-
A0W68_RS05960 (A0W68_05960)	waaV	1120412..1121236 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
A0W68_RS05965 (A0W68_05965)	waaF	1121295..1122254 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
A0W68_RS05970 (A0W68_05970)	gmhA	1122235..1122795 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
A0W68_RS05975 (A0W68_05975)	rfaE1	1122792..1124177 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
A0W68_RS05980 (A0W68_05980)	rfaD	1124170..1125123 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
A0W68_RS05985 (A0W68_05985)	gmhB	1125124..1125684 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
A0W68_RS05990 (A0W68_05990)	-	1125766..1126068 (+)	303	WP_002852762.1	cytochrome c	-
A0W68_RS05995 (A0W68_05995)	ccoS	1126091..1126297 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=149295 A0W68_RS05965 WP_002875425.1 1121295..1122254(+) (waaF) [Campylobacter jejuni strain OD267]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=149295 A0W68_RS05965 WP_002875425.1 1121295..1122254(+) (waaF) [Campylobacter jejuni strain OD267]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1