Detailed information NTG0149279

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: A0W68_RS02495
• Genome accession: NZ_CP014744
• Coordinates: 468083..470656 (-)
• Length: 857 a.a.
• NCBI ID: WP_002858618.1
• Uniprot ID: Q9PI02
• Organism: Campylobacter jejuni strain OD267
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 463083..475656

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A0W68_RS02485 (A0W68_02485)	maf	465576..466127 (+)	552	WP_002855005.1	septum formation inhibitor Maf	-
A0W68_RS02490 (A0W68_02490)	pbpA	466124..468055 (+)	1932	WP_002872099.1	penicillin-binding protein 1A	-
A0W68_RS02495 (A0W68_02495)	clpC	468083..470656 (-)	2574	WP_002858618.1	AAA family ATPase	Regulator
A0W68_RS02500 (A0W68_02500)	-	470768..471058 (-)	291	WP_002855280.1	metal-sensing transcriptional repressor	-
A0W68_RS02505 (A0W68_02505)	-	471176..472510 (+)	1335	WP_002890274.1	S41 family peptidase	-
A0W68_RS02510 (A0W68_02510)	purC	472512..473222 (+)	711	WP_002858572.1	phosphoribosylaminoimidazolesuccinocarboxamide synthase	-
A0W68_RS02515 (A0W68_02515)	purS	473231..473476 (+)	246	WP_002858611.1	phosphoribosylformylglycinamidine synthase subunit PurS	-
A0W68_RS02520 (A0W68_02520)	purQ	473478..474150 (+)	673	Protein_481	phosphoribosylformylglycinamidine synthase I	-
A0W68_RS02525 (A0W68_02525)	-	474122..475318 (+)	1197	WP_002872001.1	SH3 domain-containing protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 95543.69 Da
• Isoelectric Point: 5.2764

>NTDB_id=149279 A0W68_RS02495 WP_002858618.1 468083..470656(-) (clpC) [Campylobacter jejuni strain OD267]
MANIQDFLTDNMLSNLESAASLAIHSKNNEVVPLHLLWALSVDSTSILNQILNKLNISKEALELEIKSRISKLATSSNVN
RENIRFSNELINSLENAKGLMSANGDSYLSVDTWLISESQKSPIKEILAQFLDLREFQKELESLRAGRKMDSKTSDETLD
SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVEALAQRIIKKDVPKSLQNKKVIA
LDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYR
KYFEKDAALQRRFQPVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAIDLIDEAAAE
LKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELANLKEKQNALNSQFENEKSVFDGISAKKKEID
LLKNEASLAKARGEFQKAAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQ
KFLEVEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKFLFDDEKAMIRFDMSEF
MEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEVEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILT
SNIASNAIMNLSGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENAAL
LIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADELHENDSIIIDAKDDEIIIKKA

Nucleotide

• Length: 2574 bp

>NTDB_id=149279 A0W68_RS02495 WP_002858618.1 468083..470656(-) (clpC) [Campylobacter jejuni strain OD267]
ATGGCAAATATACAAGATTTTTTAACTGATAATATGCTTTCAAACCTTGAAAGTGCAGCATCTTTAGCTATACATTCTAA
AAATAATGAAGTTGTACCTTTACATCTTTTATGGGCTTTAAGCGTAGATAGTACAAGTATTTTAAATCAAATTTTAAATA
AATTAAATATTTCTAAAGAAGCCTTAGAGCTTGAAATTAAAAGCAGAATTTCAAAACTTGCAACGAGTTCAAATGTAAAC
CGTGAAAATATACGCTTTTCCAATGAACTTATAAATTCATTAGAAAATGCTAAAGGATTAATGAGTGCTAATGGAGATAG
TTATTTAAGTGTGGATACTTGGCTTATAAGTGAAAGTCAAAAAAGTCCTATTAAAGAAATTTTGGCGCAATTTTTAGATT
TAAGAGAATTTCAAAAAGAGCTTGAAAGTCTAAGAGCGGGACGAAAAATGGATAGCAAAACAAGCGATGAAACTTTAGAT
AGCTTAAATAAATTTGGTATAGATTTAACCTTAAAAGCAAGCGAGGGTAAACTTGATCCTGTTATAGGCAGAGAAGAAGA
AATCGAACGTTTGATGCAAATTTTAATACGTAAAACCAAAAATAACCCTATACTTTTAGGTGAACCAGGCGTAGGAAAAA
CAGCTATAGTAGAAGCTTTAGCACAAAGAATTATTAAAAAAGATGTTCCAAAATCTTTGCAAAATAAAAAAGTCATCGCT
CTTGATATGAGTGCTTTAATTGCAGGTGCAAAATACAGAGGAGAATTTGAAGATAGATTAAAAGCTGTGGTTAATGAAGT
GATAAAAAGTGAAAATATCATTCTTTTTATCGATGAAATTCACACTATAGTAGGAGCTGGAGCGAGTGAAGGCAGCATGG
ATGCGGCAAATATTTTAAAACCTGCTCTTGCAAGAGGTGAACTCCATACCATAGGCGCAACTACTTTAAAAGAATATCGT
AAATATTTTGAAAAAGATGCAGCCTTGCAACGCCGTTTTCAACCTGTAAATGTAGGTGAGCCAAGTGTTAATGAGGCTTT
GGCTATGTTAAGGGGTATAAAAGAAAAGCTTGAAATTCATCATAATGTAACCATAAATGATAGTGCTTTAGTAGCCGCAG
CTAAACTTTCAAAGCGTTATATAGCAGATCGTTTTTTACCTGATAAGGCCATTGATTTAATCGATGAAGCTGCAGCTGAA
CTGAAAATGCAAATTGAAAGCGAACCAAGTTCTTTAAGAAAAGTACGCAAAGATATAGAAACTTTAGAAGTTGAAAATGA
AGCTTTAAAAATGGAAAATGATGAAAAAAATCAAAAAAGACTCGATGAAATCGCAAAAGAACTAGCTAATTTAAAAGAAA
AACAAAATGCCCTAAATTCACAGTTTGAAAATGAAAAAAGTGTTTTTGATGGCATAAGTGCTAAGAAAAAAGAAATTGAT
CTGCTTAAAAATGAAGCTTCTTTGGCTAAAGCTAGAGGTGAATTTCAAAAAGCAGCCGAGCTAGAGTATGGAAAAATTCC
AAGTCTTGAAAAAGAAGTAGAAATTTTAGAAGATAAATGGAAAAAAATGAGTGAAAATGGAGTTTTACTTAAAAATCAAG
TAGATGAGGATTTGGTTGCTGGAATTTTAAGCAAATGGACGGGTATTAGCGTGCAAAAAATGTTAACTTCTGAAAAACAA
AAATTCTTAGAAGTGGAAAAACATTTAAAAGAAAGTGTCATAGGACAAGATAAGGCCTTAAGTGCTTTAGCTAGAGCCAT
TAAACGTAACAAAGCAGGGCTTAATGCGGACAATAAACCTATAGGAAGCTTTTTATTTTTAGGGCCAACAGGGGTAGGAA
AAACACAATCGGCTAAAGCTTTGGCAAAATTTTTATTTGATGATGAAAAAGCAATGATTCGCTTTGATATGAGTGAATTT
ATGGAAAAACATAGTGTTTCAAGACTCTTAGGTGCGCCTCCAGGATATATAGGACATGAAGAAGGTGGAGAGCTTACTGA
AGCCGTACGAAGAAAACCTTATAGCGTGCTTTTGTTTGATGAAGTTGAAAAAGCACATAAAGATGTATTTAATGTGCTTT
TAGGGATTTTAGATGATGGTAGAGCAACCGATAGCAAAGGTGTAACAGTGGATTTTAAAAATACCATTATCATTCTAACT
TCTAATATCGCCTCAAACGCTATTATGAATTTAAGCGGAAAAGAACAAGAAGATGCGGTAAAAAATGAGTTAAAAAATTT
CTTTAAACCTGAGTTTTTAAACCGTTTAGATGATATTATCACCTTTAATCCACTTGGAAAAGATGAAGCTTATGAAATAG
TCAAGCTTTTATTTAAAGATTTACAAATGAGCTTAGAAAACAAGGGAATAAAAGCAAGTTTAAGCGAAAATGCAGCCCTT
TTAATCGCTAAAGATGGTTTTGACCCTGATTTTGGTGCTAGACCTTTAAGAAGAGCTATTTATGATCTTATAGAAGATAA
ATTAAGCGATATGATACTTGCTGATGAACTTCATGAAAATGATAGTATTATCATTGATGCAAAAGATGATGAAATAATCA
TCAAAAAAGCTTAA

Domains

Predicted by InterProScan.

• Clp amino terminal domain, pathogenicity island component (Clp_N) (19-70)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-145)

• ATPase family associated with various cellular activities (AAA) (AAA) (204-316)

• AAA domain (Cdc48 subfamily) (AAA_2) (599-759)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (765-844)

• AAA lid domain (AAA_lid_9) (342-444)

3D structure

• AlphaFold DB: Q9PI02

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	43.291	100	0.433
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	41.217	100	0.419