Detailed information NTG0149257

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB831_RS15400
• Genome accession: NZ_CP011884
• Coordinates: 3073688..3074734 (+)
• Length: 348 a.a.
• NCBI ID: WP_254894148.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain MAVP-Q
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3068688..3079734

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB831_RS15380 (AB831_14460)	rplC	3069261..3069890 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
AB831_RS15385 (AB831_14465)	rpsJ	3069905..3070216 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
AB831_RS15390 (AB831_14470)	rpmE	3070674..3070895 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
AB831_RS15395 (AB831_14475)	priA	3071190..3073394 (+)	2205	WP_021449555.1	primosomal protein N'	-
AB831_RS15400 (AB831_14480)	cytR	3073688..3074734 (+)	1047	WP_254894148.1	DNA-binding transcriptional regulator CytR	Regulator
AB831_RS15405 (AB831_14485)	ftsN	3074910..3075455 (+)	546	WP_024703418.1	cell division protein FtsN	-
AB831_RS15410 (AB831_14490)	hslV	3075619..3076170 (+)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
AB831_RS15415 (AB831_14495)	hslU	3076194..3077525 (+)	1332	WP_021449544.1	HslU--HslV peptidase ATPase subunit	-
AB831_RS15420 (AB831_14500)	-	3077710..3078627 (+)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB831_RS15425 (AB831_14505)	rraA	3078704..3079216 (+)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
AB831_RS15430 (AB831_14510)	zapB	3079321..3079563 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38445.17 Da
• Isoelectric Point: 6.7430

>NTDB_id=149257 AB831_RS15400 WP_254894148.1 3073688..3074734(+) (cytR) [Vibrio parahaemolyticus strain MAVP-Q]
MTSSWQKFERLNTMATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVP
DICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEF
APELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKA
VRKLLELPEPPTAIFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELL
KGHDVHSGSRLLETKLVVRGSAAPPQRA

Nucleotide

• Length: 1047 bp

>NTDB_id=149257 AB831_RS15400 WP_254894148.1 3073688..3074734(+) (cytR) [Vibrio parahaemolyticus strain MAVP-Q]
ATAACGTCATCTTGGCAAAAATTTGAGAGGTTAAACACTATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTC
GACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAAAGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCC
TTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATCTACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCT
GACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGTATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCT
CGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTTTGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTAC
TGCTTGGTACCGACCTGCCATTTGATGTCAGCAAGCCAGAACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTT
GCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAACCTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACT
TGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACACAGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAG
CCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACAGCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCT
GTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCGATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCA
AGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATCTGTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACT
GCGATCCACCGTTAACAACCATTTCTCAACCTCGTTATGAAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTCCTT
AAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAAACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACG
CGCCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-341)

• Bacterial regulatory proteins, lacI family (LacI) (16-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	95.977	0.871