Detailed information NTG0149178

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABU16_RS10930
• Genome accession: NZ_CP011882
• Coordinates: 2117094..2118047 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis strain TO-A JPC
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2112094..2123047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABU16_RS10905 (ABU16_2140)	argF	2113926..2114885 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
ABU16_RS10910 (ABU16_2141)	yjzC	2114971..2115150 (+)	180	WP_003245356.1	YjzC family protein	-
ABU16_RS10915 (ABU16_2142)	yjzD	2115196..2115381 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
ABU16_RS10920 (ABU16_2143)	-	2115630..2116364 (+)	735	WP_003245223.1	hypothetical protein	-
ABU16_RS10925 (ABU16_2145)	-	2116446..2117003 (+)	558	WP_003232974.1	hypothetical protein	-
ABU16_RS10930 (ABU16_2146)	med	2117094..2118047 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
ABU16_RS10935 (ABU16_2147)	comZ	2118062..2118253 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ABU16_RS10940 (ABU16_2148)	yjzB	2118283..2118522 (-)	240	WP_003232972.1	spore coat protein YjzB	-
ABU16_RS10945 (ABU16_2149)	fabH	2118687..2119625 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
ABU16_RS10950 (ABU16_2150)	fabF	2119648..2120889 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
ABU16_RS10955 (ABU16_2151)	yjaZ	2120965..2121750 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
ABU16_RS10960 (ABU16_2152)	appD	2121942..2122928 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=149178 ABU16_RS10930 WP_003245494.1 2117094..2118047(+) (med) [Bacillus subtilis strain TO-A JPC]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=149178 ABU16_RS10930 WP_003245494.1 2117094..2118047(+) (med) [Bacillus subtilis strain TO-A JPC]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1