Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ABU16_RS06840 | Genome accession | NZ_CP011882 |
| Coordinates | 1324791..1325240 (-) | Length | 149 a.a. |
| NCBI ID | WP_003246436.1 | Uniprot ID | A0AAE2SFQ0 |
| Organism | Bacillus subtilis strain TO-A JPC | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1319791..1330240
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABU16_RS06805 (ABU16_1339) | yckA | 1320059..1320739 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| ABU16_RS06810 (ABU16_1340) | yckB | 1320749..1321612 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| ABU16_RS22350 | - | 1321774..1321971 (+) | 198 | Protein_1308 | hypothetical protein | - |
| ABU16_RS06820 (ABU16_1341) | - | 1322008..1322328 (+) | 321 | Protein_1309 | RDD family protein | - |
| ABU16_RS06825 (ABU16_1342) | yckD | 1322410..1322742 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| ABU16_RS06830 (ABU16_1343) | bglC | 1322896..1324329 (+) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| ABU16_RS06835 (ABU16_1344) | nin/comJ | 1324366..1324764 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| ABU16_RS06840 (ABU16_1345) | nucA/comI | 1324791..1325240 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| ABU16_RS06845 (ABU16_1346) | tlpC | 1325408..1327129 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| ABU16_RS06850 (ABU16_1347) | hxlB | 1327240..1327797 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| ABU16_RS06855 (ABU16_1348) | hxlA | 1327803..1328435 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| ABU16_RS06860 (ABU16_1349) | hxlR | 1328668..1329030 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16486.48 Da Isoelectric Point: 4.6274
>NTDB_id=149160 ABU16_RS06840 WP_003246436.1 1324791..1325240(-) (nucA/comI) [Bacillus subtilis strain TO-A JPC]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=149160 ABU16_RS06840 WP_003246436.1 1324791..1325240(-) (nucA/comI) [Bacillus subtilis strain TO-A JPC]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |