Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ABU16_RS05080 | Genome accession | NZ_CP011882 |
| Coordinates | 997431..997721 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain TO-A JPC | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 992431..1002721
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABU16_RS05040 (ABU16_1023) | darA | 992454..992783 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| ABU16_RS05045 (ABU16_1024) | yaaR | 992796..993236 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| ABU16_RS05050 (ABU16_1025) | holB | 993248..994237 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| ABU16_RS05055 (ABU16_1026) | ricT | 994240..995067 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| ABU16_RS05060 (ABU16_1027) | yabA | 995082..995441 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| ABU16_RS05065 (ABU16_1028) | trmNF | 995500..996243 (+) | 744 | WP_003226765.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ABU16_RS05070 | yazA | 996230..996529 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| ABU16_RS05075 (ABU16_1030) | rsmI | 996504..997382 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ABU16_RS05080 (ABU16_1031) | abrB | 997431..997721 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| ABU16_RS05085 (ABU16_1032) | metG | 998216..1000210 (+) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| ABU16_RS05090 (ABU16_1033) | dayD | 1000289..1001056 (+) | 768 | WP_003226756.1 | TatD family hydrolase | - |
| ABU16_RS05095 (ABU16_1034) | yabE | 1001212..1002525 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=149155 ABU16_RS05080 WP_003226760.1 997431..997721(-) (abrB) [Bacillus subtilis strain TO-A JPC]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=149155 ABU16_RS05080 WP_003226760.1 997431..997721(-) (abrB) [Bacillus subtilis strain TO-A JPC]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |