Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | AS588_RS09110 | Genome accession | NZ_CP014700 |
| Coordinates | 2001298..2001963 (-) | Length | 221 a.a. |
| NCBI ID | WP_003154892.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain S499 | ||
| Function | promoting transcription of comS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1996298..2006963
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AS588_RS09100 (AS588_09100) | - | 1997657..2000839 (-) | 3183 | WP_015388361.1 | type 2 lanthipeptide synthetase LanM family protein | - |
| AS588_RS09105 (AS588_09105) | - | 2000924..2001106 (-) | 183 | WP_003154891.1 | plantaricin C family lantibiotic | - |
| AS588_RS09110 (AS588_09110) | comA | 2001298..2001963 (-) | 666 | WP_003154892.1 | response regulator transcription factor | Regulator |
| AS588_RS09115 (AS588_09115) | - | 2001975..2003225 (-) | 1251 | WP_003154893.1 | sensor histidine kinase | - |
| AS588_RS09120 (AS588_09120) | - | 2003291..2003482 (-) | 192 | WP_003154894.1 | hypothetical protein | - |
| AS588_RS09125 (AS588_09125) | - | 2003500..2004231 (-) | 732 | WP_003154895.1 | ABC transporter permease | - |
| AS588_RS09130 (AS588_09130) | - | 2004212..2005147 (-) | 936 | WP_015388364.1 | ABC transporter ATP-binding protein | - |
| AS588_RS09135 (AS588_09135) | - | 2005267..2006625 (-) | 1359 | WP_003154898.1 | sensor histidine kinase | - |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 25144.33 Da Isoelectric Point: 6.2410
>NTDB_id=149149 AS588_RS09110 WP_003154892.1 2001298..2001963(-) (comA) [Bacillus amyloliquefaciens strain S499]
MIKILLIDDHIGVAQGTKAILEKSNKMGVTILSCCKEVLNHLKHYEYDLILLDLYMPELNGMELSKMILRESPDQKIIIY
TGFDISVHFNLLVEVGVSGFISKSSTEEHMIKVIESVIEGDTIIPTHLFKQLRRTEANTFNIDKLEDRIRDITLNEREQD
ILAGVAEGMTNRELSAKLLISQRAVEYILTGVYNKLGVKSRTEALIKANRYSLISMKTIYE
MIKILLIDDHIGVAQGTKAILEKSNKMGVTILSCCKEVLNHLKHYEYDLILLDLYMPELNGMELSKMILRESPDQKIIIY
TGFDISVHFNLLVEVGVSGFISKSSTEEHMIKVIESVIEGDTIIPTHLFKQLRRTEANTFNIDKLEDRIRDITLNEREQD
ILAGVAEGMTNRELSAKLLISQRAVEYILTGVYNKLGVKSRTEALIKANRYSLISMKTIYE
Nucleotide
Download Length: 666 bp
>NTDB_id=149149 AS588_RS09110 WP_003154892.1 2001298..2001963(-) (comA) [Bacillus amyloliquefaciens strain S499]
ATGATAAAGATTCTATTAATTGATGATCATATTGGTGTTGCTCAAGGGACAAAAGCCATTCTTGAAAAAAGCAATAAAAT
GGGAGTAACAATATTGTCTTGCTGTAAAGAAGTACTTAATCACCTTAAGCATTATGAGTATGACTTAATTTTACTTGATT
TATATATGCCGGAGTTAAATGGAATGGAATTGTCAAAAATGATTCTTAGAGAGAGCCCCGATCAAAAAATTATAATTTAT
ACTGGTTTTGATATCTCTGTGCATTTCAATCTTTTGGTTGAAGTTGGTGTTTCCGGGTTCATAAGTAAGTCATCAACAGA
AGAACATATGATAAAAGTAATTGAAAGTGTCATTGAGGGAGATACCATTATTCCTACTCATCTCTTTAAACAATTAAGAA
GAACAGAAGCAAATACGTTCAACATTGATAAGCTTGAAGATAGAATAAGAGATATTACTTTAAATGAAAGAGAACAAGAT
ATCTTAGCGGGCGTAGCGGAGGGAATGACAAACCGGGAATTATCAGCAAAGCTGTTGATCAGTCAAAGAGCGGTTGAATA
CATTCTTACTGGTGTGTACAACAAGCTCGGAGTAAAATCCAGAACAGAGGCACTGATCAAAGCAAATCGATATTCATTAA
TTTCTATGAAAACTATATATGAGTAA
ATGATAAAGATTCTATTAATTGATGATCATATTGGTGTTGCTCAAGGGACAAAAGCCATTCTTGAAAAAAGCAATAAAAT
GGGAGTAACAATATTGTCTTGCTGTAAAGAAGTACTTAATCACCTTAAGCATTATGAGTATGACTTAATTTTACTTGATT
TATATATGCCGGAGTTAAATGGAATGGAATTGTCAAAAATGATTCTTAGAGAGAGCCCCGATCAAAAAATTATAATTTAT
ACTGGTTTTGATATCTCTGTGCATTTCAATCTTTTGGTTGAAGTTGGTGTTTCCGGGTTCATAAGTAAGTCATCAACAGA
AGAACATATGATAAAAGTAATTGAAAGTGTCATTGAGGGAGATACCATTATTCCTACTCATCTCTTTAAACAATTAAGAA
GAACAGAAGCAAATACGTTCAACATTGATAAGCTTGAAGATAGAATAAGAGATATTACTTTAAATGAAAGAGAACAAGAT
ATCTTAGCGGGCGTAGCGGAGGGAATGACAAACCGGGAATTATCAGCAAAGCTGTTGATCAGTCAAAGAGCGGTTGAATA
CATTCTTACTGGTGTGTACAACAAGCTCGGAGTAAAATCCAGAACAGAGGCACTGATCAAAGCAAATCGATATTCATTAA
TTTCTATGAAAACTATATATGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Bacillus subtilis subsp. subtilis str. 168 |
41.232 |
95.475 |
0.394 |