Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACJ69_RS03435 Genome accession   NZ_CP011863
Coordinates   710789..711415 (+) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter asburiae strain ATCC 35953     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 705789..716415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJ69_RS03415 (ACJ69_03400) - 706189..707949 (-) 1761 WP_059346435.1 Lon protease family protein -
  ACJ69_RS03420 (ACJ69_03405) matP 708136..708588 (+) 453 WP_038417562.1 macrodomain Ter protein MatP -
  ACJ69_RS03425 (ACJ69_03410) ompA 708652..709707 (-) 1056 WP_115504044.1 porin OmpA -
  ACJ69_RS03430 (ACJ69_03415) sulA 710062..710571 (-) 510 WP_038417560.1 SOS-induced cell division inhibitor SulA -
  ACJ69_RS03435 (ACJ69_03420) sxy/tfoX 710789..711415 (+) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  ACJ69_RS03440 (ACJ69_03425) yccS 711372..713534 (-) 2163 WP_059346436.1 YccS family putative transporter -
  ACJ69_RS03445 (ACJ69_03430) - 713554..713999 (-) 446 Protein_678 YccF domain-containing protein -
  ACJ69_RS03450 (ACJ69_03435) helD 714123..716177 (+) 2055 WP_059346437.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=149115 ACJ69_RS03435 WP_023311030.1 710789..711415(+) (sxy/tfoX) [Enterobacter asburiae strain ATCC 35953]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=149115 ACJ69_RS03435 WP_023311030.1 710789..711415(+) (sxy/tfoX) [Enterobacter asburiae strain ATCC 35953]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCTCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCACCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGCGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAACGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACCTTTCAGCTTGAGGTTTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCAAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCGGGCAT
TCGCCGGGAGCTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567


Multiple sequence alignment