Detailed information NTG0149064

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: WM48_RS21765
• Genome accession: NZ_CP014667
• Coordinates: 4438959..4439984 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ECONIH2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4433959..4444984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WM48_RS21735 (WM48_21715)	zapB	4434043..4434288 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
WM48_RS21740 (WM48_21720)	rraA	4434373..4434858 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
WM48_RS21745 (WM48_21725)	menA	4434951..4435877 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
WM48_RS21750 (WM48_21730)	hslU	4435944..4437275 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
WM48_RS21755 (WM48_21735)	hslV	4437285..4437815 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
WM48_RS21760 (WM48_21740)	ftsN	4437908..4438867 (-)	960	WP_000068847.1	cell division protein FtsN	-
WM48_RS21765 (WM48_21745)	cytR	4438959..4439984 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
WM48_RS21770 (WM48_21750)	priA	4440140..4442338 (-)	2199	WP_001298416.1	primosomal protein N'	Machinery gene
WM48_RS21775 (WM48_21755)	rpmE	4442541..4442753 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
WM48_RS21780 (WM48_21760)	yiiX	4442814..4443422 (-)	609	WP_000702297.1	YiiX family permuted papain-like enzyme	-
WM48_RS21785 (WM48_21765)	metJ	4443482..4443799 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=149064 WM48_RS21765 WP_000644904.1 4438959..4439984(-) (cytR) [Escherichia coli strain ECONIH2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=149064 WM48_RS21765 WP_000644904.1 4438959..4439984(-) (cytR) [Escherichia coli strain ECONIH2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628